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Structure paper

TitleXyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors
Journal, issue, pagesNature Communications, Vol. 12, Page 4049-, Year 2021
Publish dateNov 3, 2020 (structure data deposition date)
AuthorsVieira, P.S. / Bonfim, I.M. / Araujo, E.A. / Melo, R.R. / Lima, A.R. / Fessel, M.R. / Paixao, D.A.A. / Persinoti, G.F. / Rocco, S.A. / Lima, T.B. ...Vieira, P.S. / Bonfim, I.M. / Araujo, E.A. / Melo, R.R. / Lima, A.R. / Fessel, M.R. / Paixao, D.A.A. / Persinoti, G.F. / Rocco, S.A. / Lima, T.B. / Pirolla, R.A.S. / Morais, M.A.B. / Correa, J.B.L. / Zanphorlin, L.M. / Diogo, J.A. / Lima, E.A. / Grandis, A. / Buckeridge, M.S. / Gozzo, F.C. / Benedetti, C.E. / Polikarpov, I. / Giuseppe, P.O. / Murakami, M.T.
External linksNature Communications / Search PubMed
MethodsX-ray diffraction
Resolution1.556 - 2.045 Å
Structure data

PDB-7kmm:
Crystal structure of XAC1771, a novel carbohydrate acetylesterase from Xanthomonas citri
Method: X-RAY DIFFRACTION / Resolution: 1.899 Å

PDB-7kmn:
Crystal structure of XAC1772, a GH35 xyloglucan-active beta-galactosidase from Xanthomonas citri
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-7kmo:
Crystal structure of the GH35 beta-galactosidase (Xac1772) from Xanthomonas citri in complex with galactose
Method: X-RAY DIFFRACTION / Resolution: 1.753 Å

PDB-7kmp:
Crystal structure of the GH31 alpha-xylosidase (Xac1773) from Xanthomonas citri
Method: X-RAY DIFFRACTION / Resolution: 1.556 Å

PDB-7kmq:
Crystal structure of the GH95 alpha-L-1,2-fucosidase (Xac1774) from Xanthomonas citri
Method: X-RAY DIFFRACTION / Resolution: 2.045 Å

PDB-7kn8:
Crystal structure of the GH74 xyloglucanase from Xanthomonas campestris (Xcc1752)
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-7knc:
Crystal structure of the GH31 alpha-xylosidase (Xac1773) from Xanthomonas citri
Method: X-RAY DIFFRACTION / Resolution: 1.873 Å

Chemicals

ChemComp-ZN:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-SO4:
SULFATE ION

ChemComp-GLA:
alpha-D-galactopyranose

ChemComp-GOL:
GLYCEROL

ChemComp-K:
Unknown entry

ChemComp-CA:
Unknown entry

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-NA:
Unknown entry

ChemComp-IOD:
IODIDE ION

ChemComp-XYS:
alpha-D-xylopyranose

Source
  • xanthomonas axonopodis pv. citri (strain 306) (bacteria)
  • xanthomonas campestris pv. campestris (strain atcc 33913 / dsm 3586 / ncppb 528 / lmg 568 / p 25) (bacteria)
KeywordsHYDROLASE / Carbohydrate esterase / SGNH-hydrolase / Xyloglucan / GDSL-like esterase / Glycoside Hydrolase Family 35 / Glycoside Hydrolase Family 31 / Glycoside Hydrolase Family 95 / Glycoside Hydrolase Family 74 / Xyloglucanase / Glycoside Hydrolase Family GH31

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