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Structure paper

TitleStructural snapshots of CmoB in various states during wobble uridine modification of tRNA.
Journal, issue, pagesBiochem. Biophys. Res. Commun., Vol. 534, Page 604-609, Year 2021
Publish dateAug 18, 2020 (structure data deposition date)
AuthorsJeong, S. / Kim, J.
External linksBiochem. Biophys. Res. Commun. / PubMed:33213836
MethodsX-ray diffraction
Resolution2.1 - 2.9 Å
Structure data

PDB-7ct8:
Crystal structure of apo CmoB from Vibrio Vulnificus
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-7ct9:
Crystal structure of SAH bound CmoB from Vibrio Vulnificus
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-7cta:
Crystal structure of Cx-SAM bound CmoB from Vibrio vulnificus
Method: X-RAY DIFFRACTION / Resolution: 2.9 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-SAH:
S-ADENOSYL-L-HOMOCYSTEINE

ChemComp-MLI:
MALONATE ION

ChemComp-PO4:
PHOSPHATE ION

ChemComp-GEK:
(2S)-4-[{[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}(carboxylatomethyl)sulfonio]

ChemComp-SO4:
SULFATE ION

Source
  • vibrio vulnificus mo6-24/o (bacteria)
KeywordsTRANSFERASE / carboxymethyl transferase / tRNA modification / SAH / S-adenosyl homocysteine / Cx-SAM

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