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Structure paper

TitleThe C-terminal flexible region of branched-chain polyamine synthase facilitates substrate specificity and catalysis.
Journal, issue, pagesFebs J., Vol. 286, Page 3926-3940, Year 2019
Publish dateDec 31, 2018 (structure data deposition date)
AuthorsHidese, R. / Toyoda, M. / Yoshino, K.I. / Fukuda, W. / Wihardja, G.A. / Kimura, S. / Fujita, J. / Niitsu, M. / Oshima, T. / Imanaka, T. ...Hidese, R. / Toyoda, M. / Yoshino, K.I. / Fukuda, W. / Wihardja, G.A. / Kimura, S. / Fujita, J. / Niitsu, M. / Oshima, T. / Imanaka, T. / Mizohata, E. / Fujiwara, S.
External linksFebs J. / PubMed:31162806
MethodsX-ray diffraction
Resolution1.66 - 2 Å
Structure data

PDB-6j26:
Crystal structure of the branched-chain polyamine synthase from Thermococcus kodakarensis (Tk-BpsA) in complex with N4-bis(aminopropyl)spermidine and 5'-methylthioadenosine
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-6j27:
Crystal structure of the branched-chain polyamine synthase from Thermus thermophilus (Tth-BpsA) in complex with N4-aminopropylspermidine and 5'-methylthioadenosine
Method: X-RAY DIFFRACTION / Resolution: 1.66 Å

PDB-6j28:
Crystal structure of the branched-chain polyamine synthase C9 mutein from Thermus thermophilus (Tth-BpsA C9) in complex with N4-aminopropylspermidine and 5'-methylthioadenosine
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

Chemicals

ChemComp-MTA:
5'-DEOXY-5'-METHYLTHIOADENOSINE

ChemComp-B5L:
N~1~,N~1~,N~1~-tris(3-azaniumylpropyl)butane-1,4-diaminium

ChemComp-FE:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-N4P:
N,N-bis(3-aminopropyl)butane-1,4-diamine

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-MES:
2-(N-MORPHOLINO)-ETHANESULFONIC ACID / pH buffer*YM

Source
  • thermococcus kodakarensis (strain atcc baa-918 / jcm 12380 / kod1) (archaea)
  • thermus thermophilus (strain hb27 / atcc baa-163 / dsm 7039) (bacteria)
KeywordsTRANSFERASE / N(4)-bis(aminopropyl)spermidine synthase / POLYAMINE BIOSYNTHESIS / SPERMIDINE / BRANCHED POLYAMINES

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