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Structure paper

TitleTransition state of phospho-enzyme hydrolysis in beta-phosphoglucomutase.
Journal, issue, pagesTo Be Published
Publish dateAug 3, 2018 (structure data deposition date)
AuthorsRobertson, A.J. / Bisson, C. / Waltho, J.P.
External linksSearch PubMed
MethodsX-ray diffraction
Resolution1.15 - 2.03 Å
Structure data

PDB-6h8u:
Beta-phosphoglucomutase from Lactococcus lactis in an open conformer to 1.9 A.
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-6h8v:
Beta-phosphoglucomutase from Lactococcus lactis in an open conformer in the P21 spacegroup to 1.8 A.
Method: X-RAY DIFFRACTION / Resolution: 1.84 Å

PDB-6h8w:
Beta-phosphoglucomutase from Lactococcus lactis in an open conformer complexed with aluminium tetrafluoride to 1.9 A.
Method: X-RAY DIFFRACTION / Resolution: 1.98 Å

PDB-6h8x:
Beta-phosphoglucomutase from Lactococcus lactis in an open conformer complexed with magnesium trifluoride to 1.8 A.
Method: X-RAY DIFFRACTION / Resolution: 1.83 Å

PDB-6h8y:
T16A variant of beta-phosphoglucomutase from Lactococcus lactis in an open conformer complexed with aluminium tetrafluoride to 1.9 A.
Method: X-RAY DIFFRACTION / Resolution: 1.89 Å

PDB-6h8z:
T16A variant of beta-phosphoglucomutase from Lactococcus lactis in an open conformer complexed with magnesium trifluoride to 1.6 A.
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-6h90:
K145A variant of beta-phosphoglucomutase from Lactococcus lactis inhibited by beryllium trifluoride to 1.3 A.
Method: X-RAY DIFFRACTION / Resolution: 1.31 Å

PDB-6h93:
Beta-phosphoglucomutase from Lactococcus lactis with inorganic phosphate bound in an open conformer to 1.8 A.
Method: X-RAY DIFFRACTION / Resolution: 1.77 Å

PDB-6h94:
T16A variant of beta-phosphoglucomutase from Lactococcus lactis with phosphate and TRIS bound in an open conformer to 1.5 A.
Method: X-RAY DIFFRACTION / Resolution: 1.49 Å

PDB-6hdf:
D170N variant of beta-phosphoglucomutase from Lactococcus lactis in an open conformer to 1.4 A.
Method: X-RAY DIFFRACTION / Resolution: 1.4 Å

PDB-6hdg:
D170N variant of beta-phosphoglucomutase from Lactococcus lactis complexed with beta-G1P in a closed conformer to 1.2 A.
Method: X-RAY DIFFRACTION / Resolution: 1.15 Å

PDB-6hdh:
R49K variant of beta-phosphoglucomutase from Lactococcus lactis in an open conformer to 1.6 A.
Method: X-RAY DIFFRACTION / Resolution: 1.62 Å

PDB-6hdi:
R49A variant of beta-phosphoglucomutase from Lactococcus lactis in an open conformer to 2.0 A.
Method: X-RAY DIFFRACTION / Resolution: 2.03 Å

PDB-6hdj:
R49K variant of beta-phosphoglucomutase from Lactococcus lactis complexed aluminium tetrafluoride and beta-G6P to 1.2 A.
Method: X-RAY DIFFRACTION / Resolution: 1.16 Å

PDB-6hdk:
R49A variant of beta-phosphoglucomutase from Lactococcus lactis complexed with aluminium tetrafluoride and beta-G6P to 1.2 A.
Method: X-RAY DIFFRACTION / Resolution: 1.24 Å

PDB-6hdl:
R49K variant of beta-phosphoglucomutase from Lactococcus lactis complexed with magnesium trifluoride and beta-G6P to 1.2 A.
Method: X-RAY DIFFRACTION / Resolution: 1.16 Å

PDB-6hdm:
R49A variant of beta-phosphoglucomutase from Lactococcus lactis complexed with magnesium trifluoride and beta-G6P to 1.3 A.
Method: X-RAY DIFFRACTION / Resolution: 1.3 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-EDO:
1,2-ETHANEDIOL / Ethylene glycol

ChemComp-HOH:
WATER / Water

ChemComp-PDO:
1,3-PROPANDIOL / 1,3-Propanediol

ChemComp-ALF:
TETRAFLUOROALUMINATE ION

ChemComp-MGF:
TRIFLUOROMAGNESATE

ChemComp-ACT:
ACETATE ION / Acetate

ChemComp-NA:
Unknown entry

ChemComp-BEF:
BERYLLIUM TRIFLUORIDE ION

ChemComp-PO4:
PHOSPHATE ION / Phosphate

ChemComp-TRS:
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL / pH buffer*YM / Tris

ChemComp-XGP:
1-O-phosphono-beta-D-glucopyranose

ChemComp-BG6:
6-O-phosphono-beta-D-glucopyranose

Source
  • lactococcus lactis subsp. lactis (strain il1403) (lactic acid bacteria)
  • lactococcus lactis subsp. lactis (lactic acid bacteria)
KeywordsISOMERASE / phosphoglucomutase / aluminium tetrafluoride / metal fluoride / transition state analogue / magnesium trifluoride / beryllium trifluoride / phospho-enzyme analog / phosphate. / phosphate binding / transition state analog

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