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Structure paper

TitleStructures of the cGMP-dependent protein kinase in malaria parasites reveal a unique structural relay mechanism for activation.
Journal, issue, pagesProc. Natl. Acad. Sci. USA, Vol. 116, Page 14164-14173, Year 2019
Publish dateSep 24, 2015 (structure data deposition date)
AuthorsEl Bakkouri, M. / Kouidmi, I. / Wernimont, A.K. / Amani, M. / Hutchinson, A. / Loppnau, P. / Kim, J.J. / Flueck, C. / Walker, J.R. / Seitova, A. ...El Bakkouri, M. / Kouidmi, I. / Wernimont, A.K. / Amani, M. / Hutchinson, A. / Loppnau, P. / Kim, J.J. / Flueck, C. / Walker, J.R. / Seitova, A. / Senisterra, G. / Kakihara, Y. / Kim, C. / Blackman, M.J. / Calmettes, C. / Baker, D.A. / Hui, R.
External linksProc. Natl. Acad. Sci. USA / PubMed:31239348
MethodsX-ray diffraction
Resolution1.65 - 2.45 Å
Structure data

PDB-5dyk:
Crystal structure of the cGMP-dependent protein kinase PKG from Plasmodium falciparum - Apo form
Method: X-RAY DIFFRACTION / Resolution: 2.45 Å

PDB-5dyl:
Crystal structure of the cGMP-dependent protein kinase PKG from Plasmodium Vivax - Apo form
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-5dzc:
Crystal structure of the cGMP-dependent protein kinase PKG from Plasmodium Vivax - AMPPNP bound
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-5e16:
Co-crystal structure of the N-termial cGMP binding domain of Plasmodium falciparum PKG with cGMP
Method: X-RAY DIFFRACTION / Resolution: 1.65 Å

Chemicals

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-SO4:
SULFATE ION

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-ANP:
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER / AMP-PNP, energy-carrying molecule analogue*YM

ChemComp-UNX:
Unknown entry

ChemComp-CL:
Unknown entry

ChemComp-NA:
Unknown entry

ChemComp-PCG:
CYCLIC GUANOSINE MONOPHOSPHATE

Source
  • plasmodium falciparum (malaria parasite P. falciparum)
  • plasmodium vivax (malaria parasite P. vivax)
  • plasmodium vivax (strain salvador i) (eukaryote)
KeywordsTRANSFERASE / Kinase / Structural Genomics / Structural Genomics Consortium / SGC / Structural Genomics Consortium (SGC) / cGMP binding domain

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