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TitleCrystallographic and glycan microarray analysis of human polyomavirus 9 VP1 identifies N-glycolyl neuraminic acid as a receptor candidate.
Journal, issue, pagesJ. Virol., Vol. 88, Page 6100-6111, Year 2014
Publish dateFeb 26, 2014 (structure data deposition date)
AuthorsKhan, Z.M. / Liu, Y. / Neu, U. / Gilbert, M. / Ehlers, B. / Feizi, T. / Stehle, T.
External linksJ. Virol. / PubMed:24648448
MethodsX-ray diffraction
Resolution2 - 2.1 Å
Structure data

PDB-4poq:
Structure of unliganded VP1 pentamer of Human Polyomavirus 9
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-4por:
Structure of Human Polyomavirus 9 VP1 pentamer in complex with 3'-sialyllactose
Method: X-RAY DIFFRACTION / Resolution: 2.09 Å

PDB-4pos:
Structure of Human Polyomavirus 9 VP1 pentamer in complex with 3'-sialyllactosamine
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-4pot:
Structure of Human Polyomavirus 9 VP1 pentamer in complex with N-glycolylneuraminic acid containing 3'-sialyllactosamine
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

Chemicals

ChemComp-CA:
Unknown entry

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-IPA:
ISOPROPYL ALCOHOL / alkaloid*YM

ChemComp-HOH:
WATER

Source
  • human polyomavirus 9
KeywordsVIRAL PROTEIN / jelly roll fold / capsid formation / receptor interaction / carbohydrate / sialyloligosaccharide / viral coat protein

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