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Structure paper

TitleImmuno- and constitutive proteasome crystal structures reveal differences in substrate and inhibitor specificity.
Journal, issue, pagesCell(Cambridge,Mass. ), Vol. 148, Page 727-738, Year 2012
Publish dateNov 15, 2011 (structure data deposition date)
AuthorsHuber, E.M. / Basler, M. / Schwab, R. / Heinemeyer, W. / Kirk, C.J. / Groettrup, M. / Groll, M.
External linksCell(Cambridge,Mass. ) / PubMed:22341445
MethodsX-ray diffraction
Resolution2.7 - 3.4 Å
Structure data

PDB-3un4:
Yeast 20S proteasome in complex with PR-957 (morpholine)
Method: X-RAY DIFFRACTION / Resolution: 3.4 Å

PDB-3un8:
Yeast 20S proteasome in complex with PR-957 (epoxide)
Method: X-RAY DIFFRACTION / Resolution: 2.7 Å

PDB-3unb:
Mouse constitutive 20S proteasome in complex with PR-957
Method: X-RAY DIFFRACTION / Resolution: 2.9 Å

PDB-3une:
Mouse constitutive 20S proteasome
Method: X-RAY DIFFRACTION / Resolution: 3.2 Å

PDB-3unf:
Mouse 20S immunoproteasome in complex with PR-957
Method: X-RAY DIFFRACTION / Resolution: 2.9 Å

PDB-3unh:
Mouse 20S immunoproteasome
Method: X-RAY DIFFRACTION / Resolution: 3.2 Å

Chemicals

ChemComp-04C:
1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol

ChemComp-HOH:
WATER

ChemComp-049:
2-(acetylamino)-4,5-anhydro-1,2-dideoxy-4-methyl-1-phenyl-D-xylitol

ChemComp-CL:
Unknown entry

ChemComp-K:
Unknown entry

ChemComp-IOD:
IODIDE ION

Source
  • saccharomyces cerevisiae (brewer's yeast)
  • mus musculus (house mouse)
KeywordsHYDROLASE/HYDROLASE INHIBITOR / Proteasome / antigen presentation / drug development / protein degradation / HYDROLASE -HYDROLASE-INHIBITOR complex / HYDROLASE-HYDROLASE INHIBITOR complex / HYDROLASE/HYDROLASE INHIBTIOR / HYDROLASE-HYDROLASE INHIBTIOR complex / 20S proteasome comprises 28 subunits; each subunit adopts the fold of an antiparallel beta-sheet flanked by helices / Protease / Regulatory complexes / Covalent binding of PR-957 to all active sites / HYDROLASE / 20S proteasome comprises 28 subunits / Cytosol

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