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Structure paper

TitleAn aspartate and a water molecule mediate efficient acid-base catalysis in a tailored antibody pocket.
Journal, issue, pagesProc. Natl. Acad. Sci. USA, Vol. 106, Page 18539-18544, Year 2009
Publish dateDec 27, 2008 (structure data deposition date)
AuthorsDebler, E.W. / Muller, R. / Hilvert, D. / Wilson, I.A.
External linksProc. Natl. Acad. Sci. USA / PubMed:19846764
MethodsX-ray diffraction
Resolution2.18 - 2.5 Å
Structure data

PDB-3fo0:
Crystal structure of hapten complex of catalytic elimination antibody 13G5 (wild-type)
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-3fo1:
Crystal structure of hapten complex of catalytic elimination antibody 13G5 (Glu(L39)Ala mutant)
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-3fo2:
Crystal structure of hapten complex of catalytic elimination antibody 13G5 (Glu(L39)Gln mutant)
Method: X-RAY DIFFRACTION / Resolution: 2.18 Å

Chemicals

ChemComp-BZH:
5-[(2-AMINO-1H-BENZIMIDAZOL-6-YL)AMINO]-5-OXOPENTANOIC ACID

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

Source
  • mus musculus (house mouse)
  • homo sapiens (human)
KeywordsIMMUNE SYSTEM / IMMUNOGLOBULIN / CATALYTIC ANTIBODY / CHIMERIC FAB / HAPTEN COMPLEX / ACID BASE CATALYSIS / PROTON TRANSFER / Immunoglobulin domain

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