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Structure paper

TitleThe deubiquitinating enzyme Otu1 releases substrates from the conserved initiation complex of the Cdc48/p97 ATPase for proteasomal degradation.
Journal, issue, pagesSci Rep, Year 2026
Publish dateMar 7, 2026
AuthorsHao Li / Haipeng Guan / Tom A Rapoport /
External linksSci Rep / PubMed:41795027
MethodsEM (single particle)
Resolution2.97 - 3.05 Å
Structure data

73365

9yrc

EMDB-73365, PDB-9yrc:
p97Ufd1-Npl4 complex processing poly-ubiquitinated substrate in the presence of ATP
Method: EM (single particle) / Resolution: 2.97 Å

EMDB-73375: Global refinement map of p97Ufd1-Npl4 complex processing poly-ubiquitinated substrate in the presence of ATP
Method: EM (single particle) / Resolution: 2.97 Å

EMDB-73376: Local refinement map of p97Ufd1-Npl4 complex processing poly-ubiquitinated substrate in the presence of ATP, focused on p97 D1 ring and Npl4
Method: EM (single particle) / Resolution: 3.05 Å

Chemicals

ChemComp-ATP:
ADENOSINE-5'-TRIPHOSPHATE / ATP, energy-carrying molecule*YM

ChemComp-ADP:
ADENOSINE-5'-DIPHOSPHATE / ADP, energy-carrying molecule*YM

Source
  • homo sapiens (human)
  • saccharomyces cerevisiae (brewer's yeast)
KeywordsTRANSLOCASE / p97 / VCP / AAA+ ATPase

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