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Structure paper

TitleTom1p ubiquitin ligase structure, interaction with Spt6p, and function in maintaining normal transcript levels and the stability of chromatin in promoters
Journal, issue, pagesElife, Year 2024
Publish dateNov 21, 2024 (structure data deposition date)
AuthorsMadrigal J / Schubert HL / Sdano MA / McCullough L / Connell Z / Formosa T / Hill CP
External linksElife / Search PubMed
MethodsEM (single particle) / X-ray diffraction
Resolution3.07 - 7.79 Å
Structure data

47989

9egk

EMDB-47989: E3 ubiquitin ligase HUWE1 homolog Tom1p in closed-conformation with internal Acidic Domain deletion.
PDB-9egk: E3 ubiquitin ligase HUWE1 homolog Tom1p in closed-conformation with internal Acidic Domain deletion
Method: EM (single particle) / Resolution: 3.07 Å

48145

9eld

EMDB-48145, PDB-9eld:
Full-length and internally HIS-tagged yeast E3 ubiquitin ligase Tom1p in an open-conformation
Method: EM (single particle) / Resolution: 7.1 Å

EMDB-48279: cryo-EM map of a full-length and internally HIS-tagged yeast E3 ubiquitin ligase Tom1p construct in an intermediate-open conformation state
Method: EM (single particle) / Resolution: 7.79 Å

PDB-9cmr:
Saccharomyces cerevisiae Tom1 HECT domain
Method: X-RAY DIFFRACTION / Resolution: 3.3 Å

Chemicals

ChemComp-SO4:
SULFATE ION

ChemComp-HOH:
WATER

Source
  • saccharomyces cerevisiae (brewer's yeast)
KeywordsLIGASE / HECT / ubiquitin ligase / GENE REGULATION / alpha solenoid / E3 ubiquitin ligase / stress response / cell-cycle / TRANSFERASE / cell cycle / solenoid / RNA

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