EMDB/PDB/SASBDBから引用されている文献のデータベース

キーワード
構造解析手法	All X線回折 NMR 電子顕微鏡小角散乱中性子線回折線維回折粉末回折赤外分光 EPR FRET 理論モデルハイブリッド
著者・登録者
ジャーナル
IF	>30 >20 >10 >5 all

タイトル	Multiple substrate recognition by yeast diadenosine and diphosphoinositol polyphosphate phosphohydrolase through phosphate clamping.
ジャーナル・号・ページ	Sci Adv, Vol. 7, Year 2021
掲載日	2020年11月3日 (構造データの登録日)
著者	Marquez-Monino, M.A. / Ortega-Garcia, R. / Shipton, M.L. / Franco-Echevarria, E. / Riley, A.M. / Sanz-Aparicio, J. / Potter, B.V.L. / Gonzalez, B.
リンク	Sci Adv / PubMed:33893105
手法	X線回折
解像度	1.6 - 2.65 Å
構造データ	PDB-7aui: Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 in complex with InsP6 手法: X-RAY DIFFRACTION / 解像度: 1.98 Å PDB-7auj: Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 mutation E80Q in complex with 1-InsP7 手法: X-RAY DIFFRACTION / 解像度: 2.1 Å PDB-7auk: Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 in complex with 5-InsP7 手法: X-RAY DIFFRACTION / 解像度: 2.0 Å PDB-7aul: Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 in complex with 5-InsP7 in presence of Mg 手法: X-RAY DIFFRACTION / 解像度: 1.85 Å PDB-7aum: Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 in complex with 5-PCF2Am-InsP5 手法: X-RAY DIFFRACTION / 解像度: 2.07 Å PDB-7aun: Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 in complex with PCP-InsP8 手法: X-RAY DIFFRACTION / 解像度: 1.95 Å PDB-7auo: Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 in complex with PA-InsP8 手法: X-RAY DIFFRACTION / 解像度: 2.65 Å PDB-7aup: Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 in complex with PCP-InsP7 手法: X-RAY DIFFRACTION / 解像度: 1.85 Å PDB-7auq: Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 in complex with Ap5A and Ca2+ 手法: X-RAY DIFFRACTION / 解像度: 2.25 Å PDB-7aur: Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 in complex with AMP-PNP 手法: X-RAY DIFFRACTION / 解像度: 1.65 Å PDB-7aus: Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 in complex with P15 手法: X-RAY DIFFRACTION / 解像度: 1.75 Å PDB-7aut: Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 mutation K63A 手法: X-RAY DIFFRACTION / 解像度: 1.6 Å PDB-7auu: Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1-nose mutant in complex with InsP6 手法: X-RAY DIFFRACTION / 解像度: 2.45 Å
化合物	ChemComp-IHP: INOSITOL HEXAKISPHOSPHATE / フィチン酸 ChemComp-HOH: WATER ChemComp-O81: (1S,2R,3R,4S,5S,6R)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl trihydrogen diphosphate / PP-IP₅ ChemComp-MG: Unknown entry / マグネシウムジカチオン ChemComp-I7P: (1r,2R,3S,4s,5R,6S)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl trihydrogen diphosphate / D-myo-イノシト-ル1,2,3,4,6-ペンタキスりん酸5-二りん酸 ChemComp-ACT: ACETATE ION / 酢酸イオン ChemComp-KDJ: (1,1-difluoro-2-oxo-2-{[(1s,2R,3S,4s,5R,6S)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl]amino}ethyl)phosphonic acid ChemComp-4WZ: {[(1R,3S,4S,5R,6S)-2,4,5,6-tetrakis(phosphonooxy)cyclohexane-1,3-diyl]bis[oxy(hydroxyphosphoryl)methanediyl]}bis(phosphonic acid) ChemComp-4WY: {[(1R,3S,4S,5R,6S)-2,4,5,6-tetrakis(phosphonooxy)cyclohexane-1,3-diyl]bis[oxy(2-oxoethane-2,1-diyl)]}bis(phosphonic acid) ChemComp-VEB: [oxidanyl-[(2~{S},3~{S},5~{R},6~{S})-2,3,4,5,6-pentaphosphonooxycyclohexyl]oxy-phosphoryl]methylphosphonic acid / 6β-[(ホスホノ)メチルホスホニルオキシ]-1α,2β,3α,4β,5β-ペンタキス(ホスホノオキシ)シクロヘキサン ChemComp-5FA: ADENOSINE-5'-PENTAPHOSPHATE / アデノシン5′-ペンタホスファ-ト ChemComp-ADE: ADENINE / アデニン ChemComp-CA: Unknown entry / カルシウムジカチオン ChemComp-ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER / AMP-PNP / AMP-PNP, エネルギー貯蔵分子類似体YM ChemComp-CL: Unknown entry / クロリド ChemComp-RYT*: pentadecaphosphate
由来	saccharomyces cerevisiae (strain atcc 204508 / s288c) (パン酵母)
キーワード	HYDROLASE / Inositol / PP-InsP / Pyrophosphatase / Polyphosphate / Diadenosine polyphosphate / DDP1 / Nudix / Pyrophosphate