EMDB/PDB/SASBDBから引用されている文献のデータベース

キーワード
構造解析手法	All X線回折 NMR 電子顕微鏡小角散乱中性子線回折線維回折粉末回折赤外分光 EPR FRET 理論モデルハイブリッド
著者・登録者
ジャーナル
IF	>30 >20 >10 >5 all

タイトル	Structural and kinetic insights into binding and incorporation of L-nucleotide analogs by a Y-family DNA polymerase.
ジャーナル・号・ページ	Nucleic Acids Res., Vol. 42, Page 9984-9995, Year 2014
掲載日	2014年7月16日 (構造データの登録日)
著者	Gaur, V. / Vyas, R. / Fowler, J.D. / Efthimiopoulos, G. / Feng, J.Y. / Suo, Z.
リンク	Nucleic Acids Res. / PubMed:25104018
手法	X線回折
解像度	1.8 - 2.4 Å
構造データ	PDB-4qw8: TERNARY CRYSTAL STRUCTURES of A Y-FAMILY DNA POLYMERASE DPO4 FROM SULFOLOBUS SOLFATARICUS IN COMPLEX WITH DNA AND D-DCTP 手法: X-RAY DIFFRACTION / 解像度: 2.29 Å PDB-4qw9: TERNARY CRYSTAL STRUCTURES of A Y-FAMILY DNA POLYMERASE DPO4 FROM SULFOLOBUS SOLFATARICUS IN COMPLEX WITH DNA AND (-)FTC-PPNP 手法: X-RAY DIFFRACTION / 解像度: 2.4 Å PDB-4qwa: TERNARY CRYSTAL STRUCTURES OF A Y-FAMILY DNA POLYMERASE DPO4 FROM SULFOLOBUS SOLFATARICUS in COMPLEX WITH DNA AND (-)3TC-DP 手法: X-RAY DIFFRACTION / 解像度: 2.2 Å PDB-4qwb: CRYSTAL STRUCTURE of DPO4 LINKER REGION P236A MUTANT WITH AN INCOMING D-dCDP 手法: X-RAY DIFFRACTION / 解像度: 1.8 Å PDB-4qwc: Ternary Crystal Structures of a Y-family DNA polymerase DPO4 from Sulfobus Solfataricus in Comples with DNA and L-DCDP 手法: X-RAY DIFFRACTION / 解像度: 2.4 Å PDB-4qwd: TERNARY CRYSTAL STRUCTURES of A Y-FAMILY DNA POLYMERASE DPO4 FROM SULFOLOBUS SOLFATARICUS IN COMPLEX WITH DNA AND (-)3TC-PPNP 手法: X-RAY DIFFRACTION / 解像度: 2.05 Å PDB-4qwe: TERNARY CRYSTAL STRUCTURES of A Y-FAMILY DNA POLYMERASE DPO4 FROM SULFOLOBUS SOLFATARICUS IN COMPLEX WITH DNA AND (-)FTC-DP 手法: X-RAY DIFFRACTION / 解像度: 2.2 Å
化合物	ChemComp-DCP: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE / dCTP ChemComp-CA: Unknown entry / カルシウムジカチオン ChemComp-HOH: WATER ChemComp-0G4: [[[[(2R,5S)-5-(4-azanyl-5-fluoranyl-2-oxidanylidene-pyrimidin-1-yl)-1,3-oxathiolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy ChemComp-0G8: [(2R,5S)-5-(4-amino-2-oxopyrimidin-1(2H)-yl)-1,3-oxathiolan-2-yl]methyl trihydrogen diphosphate / 1-[(2R)-2β-(ヒドロキシメチル)-1,3-オキサチオラン-5β-イル]シトシンジホスファ-ト ChemComp-YYY: DEOXYCYTIDINE DIPHOSPHATE / dCDP ChemComp-ACT: ACETATE ION / 酢酸イオン ChemComp-GOL: GLYCEROL / グリセロ-ル ChemComp-LTP: 4-amino-1-{2-deoxy-5-O-[(R)-hydroxy(phosphonooxy)phosphoryl]-beta-L-erythro-pentofuranosyl}pyrimidin-2(1H)-one ChemComp-3TT: [[[[(2R,5S)-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-1,3-oxathiolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]amino]phosphonic acid ChemComp-FTD: [(2R,5S)-5-(4-amino-5-fluoro-2-oxo-3,6-dihydropyrimidin-1(2H)-yl)-1,3-oxathiolan-2-yl]methyl trihydrogen diphosphate
由来	sulfolobus solfataricus (古細菌) saccharolobus solfataricus p2 (古細菌) synthetic dna (人工物)
キーワード	TRANSFERASE/DNA / Y-FAMILY DNA POLYMERASE / TRANSFERASE-DNA COMPLEX / Dpo4 / Polymerase / DBH