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TitleAncestral sequence reconstruction dissects structural and functional differences among eosinophil ribonucleases.
Journal, issue, pagesJ. Biol. Chem., Vol. 300, Page 107280-107280, Year 2024
Publish dateFeb 11, 2022 (structure data deposition date)
AuthorsTran, T.T.Q. / Narayanan, C. / Loes, A.N. / Click, T.H. / Pham, N.T.H. / Letourneau, M. / Harms, M.J. / Calmettes, C. / Agarwal, P.K. / Doucet, N.
External linksJ. Biol. Chem. / PubMed:38588810
MethodsX-ray diffraction
Resolution1.7 - 2.03 Å
Structure data

PDB-7ty1:
Crystal structure of apo eosinophil cationic protein (ribonuclease 3) from Macaca fascicularis (MfECP)
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-8f5x:
Crystal structure of human eosinophil-derived neurotoxin (EDN, ribonuclease 2) in complex with 5'-adenosine monophosphate (AMP)
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-8g9a:
Crystal structure of a resurrected ancestor (AncRNase) of the pancreatic-type RNases 2 and 3 sub-families
Method: X-RAY DIFFRACTION / Resolution: 2.03 Å

Chemicals

ChemComp-GOL:
GLYCEROL

ChemComp-CIT:
CITRIC ACID

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-HOH:
WATER

ChemComp-SIN:
SUCCINIC ACID

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-AMP:
ADENOSINE MONOPHOSPHATE / AMP*YM

ChemComp-SO4:
SULFATE ION

ChemComp-ACT:
ACETATE ION

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

Source
  • macaca fascicularis (crab-eating macaque)
  • homo sapiens (human)
  • synthetic construct (others)
KeywordsHYDROLASE / MfECP / RNase 3 / ribonuclease / crab-eating macaque / long-tailed macaque / cynomolgus monkey / eosinophil cationic protein / ECP. / EDN / RNase 2 / eosinophil-derived neurotoxin / transphosphorylase / AMP / adenosine monophosphate / Ancestral sequence reconstruction / ASR / ECP

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