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Structure paper

TitleMolecular basis for pH sensing in the KDEL trafficking receptor.
Journal, issue, pagesStructure, Vol. 32, Page 866-877.e4, Year 2024
Publish dateJun 22, 2021 (structure data deposition date)
AuthorsWu, Z. / Smith, K. / Gerondopoulos, A. / Sobajima, T. / Parker, J.L. / Barr, F.A. / Newstead, S. / Biggin, P.C.
External linksStructure / PubMed:38626766
MethodsX-ray diffraction
Resolution2.283 - 2.62 Å
Structure data

PDB-7oxe:
Crystal structure of the KDEL receptor bound to HDEF peptide at pH 6.0
Method: X-RAY DIFFRACTION / Resolution: 2.283 Å

PDB-7oye:
Crystal structure of the KDEL receptor bound to HDEL peptide at pH 7.0
Method: X-RAY DIFFRACTION / Resolution: 2.62 Å

PDB-8apy:
Crystal structure of the H12A variant of the KDEL receptor bound to sybody
Method: X-RAY DIFFRACTION / Resolution: 2.34 Å

Chemicals

ChemComp-OLC:
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate

ChemComp-HOH:
WATER

ChemComp-CO2:
CARBON DIOXIDE

Source
  • gallus gallus (chicken)
  • homo sapiens (human)
  • synthetic construct (others)
KeywordsMEMBRANE PROTEIN / Trafficking receptor / synthetic binder / KDELR

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