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Structure paper

TitleStructural basis for light control of cell development revealed by crystal structures of a myxobacterial phytochrome.
Journal, issue, pagesIUCrJ, Vol. 5, Page 619-634, Year 2018
Publish dateOct 12, 2017 (structure data deposition date)
AuthorsWoitowich, N.C. / Halavaty, A.S. / Waltz, P. / Kupitz, C. / Valera, J. / Tracy, G. / Gallagher, K.D. / Claesson, E. / Nakane, T. / Pandey, S. ...Woitowich, N.C. / Halavaty, A.S. / Waltz, P. / Kupitz, C. / Valera, J. / Tracy, G. / Gallagher, K.D. / Claesson, E. / Nakane, T. / Pandey, S. / Nelson, G. / Tanaka, R. / Nango, E. / Mizohata, E. / Owada, S. / Tono, K. / Joti, Y. / Nugent, A.C. / Patel, H. / Mapara, A. / Hopkins, J. / Duong, P. / Bizhga, D. / Kovaleva, S.E. / St Peter, R. / Hernandez, C.N. / Ozarowski, W.B. / Roy-Chowdhuri, S. / Yang, J.H. / Edlund, P. / Takala, H. / Ihalainen, J. / Brayshaw, J. / Norwood, T. / Poudyal, I. / Fromme, P. / Spence, J.C.H. / Moffat, K. / Westenhoff, S. / Schmidt, M. / Stojkovic, E.A.
External linksIUCrJ / PubMed:30224965
MethodsX-ray diffraction
Resolution1.85 - 3.15 Å
Structure data

PDB-6baf:
Structure of the chromophore binding domain of Stigmatella aurantiaca phytochrome P1, wild-type
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-6bak:
The structure of the Stigmatella aurantiaca phytochrome chromophore binding domain T289H mutant
Method: X-RAY DIFFRACTION / Resolution: 1.92 Å

PDB-6bao:
Stigmatella aurantiaca phytochrome photosensory core module, wild type
Method: X-RAY DIFFRACTION / Resolution: 2.18 Å

PDB-6bap:
Stigmatella aurantiaca bacterial phytochrome PAS-GAF-PHY, T289H mutant
Method: X-RAY DIFFRACTION / Resolution: 2.65 Å

PDB-6bay:
Stigmatella aurantiaca bacterial phytochrome P1, PAS-GAF-PHY T289H mutant, room temperature structure
Method: X-RAY DIFFRACTION / Resolution: 3.15 Å

Chemicals

ChemComp-BLR:
3-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(Z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid

ChemComp-HOH:
WATER

Source
  • stigmatella aurantiaca dw4/3-1 (bacteria)
KeywordsSIGNALING PROTEIN / phytochrome / PAS-GAF-PHY / photosensory core module / T289H mutant / bacterial phytochrome / Stigmatella aurantiaca / room temperature / SACLA / T28H mutant

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