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Structure paper

TitleGenome anchoring, retention, and release by neck proteins of Herelleviridae phage 812
Journal, issue, pagesTo Be Published
Publish dateJul 27, 2023 (structure data deposition date)
AuthorsCienikova Z / Novacek J / Siborova M / Popelarova B / Fuzik T / Benesik M / Bardy P / Pantucek R / Plevka P
External linksSearch PubMed
MethodsEM (single particle) / X-ray diffraction
Resolution2.2 - 8.64 Å
Structure data

18048

8q01

EMDB-18048, PDB-8q01:
Neck of phage 812 after tail contraction (C6)
Method: EM (single particle) / Resolution: 3.58 Å

18065

8q1i

EMDB-18065, PDB-8q1i:
Neck-tail junction of phage 812 after tail contraction (C6)
Method: EM (single particle) / Resolution: 3.53 Å

18213

8q7d

EMDB-18213, PDB-8q7d:
Neck of phage 812 after tail contraction (C12)
Method: EM (single particle) / Resolution: 3.07 Å

18369

8qek

EMDB-18369, PDB-8qek:
Neck and tail of phage 812 after tail contraction (composite)
Method: EM (single particle) / Resolution: 3.6 Å

18372

8qem

EMDB-18372, PDB-8qem:
Neck channel of phage 812 after tail contraction (C1)
Method: EM (single particle) / Resolution: 3.96 Å

EMDB-18385: Consensus density for neck and tail of phage 812 after tail contraction (C6)
Method: EM (single particle) / Resolution: 4.23 Å

EMDB-18395: Portal and anchor DNA of phage 812 after tail contraction (C1)
Method: EM (single particle) / Resolution: 3.94 Å

EMDB-18412: Neck of phage 812 after complete genome ejection (C12)
Method: EM (single particle) / Resolution: 4.32 Å

18445

8qje

EMDB-18445, PDB-8qje:
Neck of phage 812 virion (C12)
Method: EM (single particle) / Resolution: 4.16 Å

18462

8qkh

EMDB-18462, PDB-8qkh:
Neck of phage 812 virion (C6)
Method: EM (single particle) / Resolution: 4.15 Å

EMDB-18489: Tail channel of phage 812 virion (C3)
Method: EM (single particle) / Resolution: 6.56 Å

EMDB-18516: Tail channel of phage 812 virion (C1)
Method: EM (single particle) / Resolution: 8.64 Å

18912

8r5g

EMDB-18912, PDB-8r5g:
Neck-tail junction of phage 812 virion (C6)
Method: EM (single particle) / Resolution: 4.28 Å

EMDB-18919: Consensus density for neck and tail of phage 812 virion (C6)
Method: EM (single particle) / Resolution: 4.64 Å

18949

8r69

EMDB-18949, PDB-8r69:
Neck and tail of phage 812 virion (composite)
Method: EM (single particle) / Resolution: 4.3 Å

PDB-8qgr:
Stopper protein of phage 812 in closed conformation
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

Chemicals

ChemComp-ZN:
Unknown entry

ChemComp-HOH:
WATER

Source
  • staphylococcus phage 812 (virus)
KeywordsVIRUS / phage / neck / connector / tail sheath / portal / tail / A-form DNA

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