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TitleChymotrypsin digestion analysis of glycyl radical and B12-dependent radical enzymes indicates common substrate-induced structural shifts.
Journal, issue, pagesSci Rep, Vol. 15, Page 45789-45789, Year 2025
Publish dateMay 29, 2025 (structure data deposition date)
AuthorsMitjkova, E. / Tars, K. / Kalnins, G.
External linksSci Rep / PubMed:41360885
MethodsX-ray diffraction
Resolution1.7 - 2.8 Å
Structure data

PDB-9rco:
1,2-propanediol dehydratase with 0.1 % glycerol additive
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-9rcp:
1,2-propanediol dehydratase with 0.1 % 1,3-propanediol additive
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-9rcq:
1,2-propanediol dehydratase with no ligand additives
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-9rcr:
1,2-propanediol dehydratase with 0.1 % 1,2-propanediol additive
Method: X-RAY DIFFRACTION / Resolution: 2.8 Å

Chemicals

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-PGR:
R-1,2-PROPANEDIOL

Source
  • raoultella planticola (bacteria)
KeywordsLYASE / glycyl radical enzyme / 1 / 2-propanediol

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