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TitleIdentification and Characterization of Thiamine Diphosphate-Dependent Lyases with an Unusual CDG Motif.
Journal, issue, pagesAngew. Chem. Int. Ed. Engl., Vol. 63, Page e202404045-e202404045, Year 2024
Publish dateJan 16, 2024 (structure data deposition date)
AuthorsLanza, L. / Rabe von Pappenheim, F. / Bjarnesen, D. / Leogrande, C. / Paul, A. / Krug, L. / Tittmann, K. / Muller, M.
External linksAngew. Chem. Int. Ed. Engl. / PubMed:38874074
MethodsX-ray diffraction
Resolution1.9 - 2.96 Å
Structure data

PDB-8rph:
JanthE from Janthinobacterium sp. HH01,ketobutyryl-ThDP
Method: X-RAY DIFFRACTION / Resolution: 2.96 Å

PDB-8rpi:
JanthE from Janthinobacterium sp. HH01, lactyl-ThDP
Method: X-RAY DIFFRACTION / Resolution: 2.71 Å

PDB-8rpj:
JanthE from Janthinobacterium sp. HH01
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

Chemicals

ChemComp-FAD:
FLAVIN-ADENINE DINUCLEOTIDE / FAD*YM

ChemComp-MG:
Unknown entry

PDB-1h2a:
SINGLE CRYSTALS OF HYDROGENASE FROM DESULFOVIBRIO VULGARIS

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-HOH:
WATER

ChemComp-TDL:
3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-(1-CARBOXY-1-HYDROXYETHYL)-5-(2-{[HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM

ChemComp-2PE:
NONAETHYLENE GLYCOL / precipitant*YM

ChemComp-TPP:
THIAMINE DIPHOSPHATE

ChemComp-1PE:
PENTAETHYLENE GLYCOL / precipitant*YM

ChemComp-ACT:
ACETATE ION

ChemComp-GOL:
GLYCEROL

Source
  • janthinobacterium sp. hh01 (bacteria)
KeywordsTRANSFERASE / THDP / FAD

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