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Structure paper

TitleSubstrate binding and catalytic mechanism of the Se-glycosyltransferase SenB in the biosynthesis of selenoneine.
Journal, issue, pagesNat Commun, Vol. 15, Page 1659-1659, Year 2024
Publish dateMay 31, 2023 (structure data deposition date)
AuthorsHuang, W. / Song, J. / Sun, T. / He, Y. / Li, X. / Deng, Z. / Long, F.
External linksNat Commun / PubMed:38395953
MethodsX-ray diffraction
Resolution1.64 - 2.15 Å
Structure data

PDB-8jjn:
Structure of SenB in complex with UDP-Glc and PO4- at 1.98 Angstroms resolution
Method: X-RAY DIFFRACTION / Resolution: 1.98 Å

PDB-8jjq:
Structure of SenB in complex with UDP-GalNAc at 1.64 Angstroms resolution
Method: X-RAY DIFFRACTION / Resolution: 1.64 Å

PDB-8jjt:
Structure of SenB in complex with UDP-GlcNAc at 1.88 Angstroms resolution
Method: X-RAY DIFFRACTION / Resolution: 1.88 Å

PDB-8k5u:
Se-glycosyltransferase RsSenB
Method: X-RAY DIFFRACTION / Resolution: 2.15 Å

Chemicals

ChemComp-UPG:
URIDINE-5'-DIPHOSPHATE-GLUCOSE

ChemComp-PO4:
PHOSPHATE ION

ChemComp-HOH:
WATER

ChemComp-UD2:
URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE

ChemComp-UD1:
URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE

Source
  • variovorax paradoxus (bacteria)
  • ramlibacter sp. (bacteria)
KeywordsTRANSFERASE / Complex with UDP-Glc and PO4- / UDP-GalNAc / UDP-GlcNAc / Apo

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