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Structure paper

TitleInvasive Staphylococcus epidermidis uses a unique processive wall teichoic acid glycosyltransferase to evade immune recognition.
Journal, issue, pagesSci Adv, Vol. 9, Page eadj2641-eadj2641, Year 2023
Publish dateNov 26, 2021 (structure data deposition date)
AuthorsGuo, Y. / Du, X. / Krusche, J. / Beck, C. / Ali, S. / Walter, A. / Winstel, V. / Mayer, C. / Codee, J.D.C. / Peschel, A. / Stehle, T.
External linksSci Adv / PubMed:38000019
MethodsX-ray diffraction
Resolution2.03 - 3.21 Å
Structure data

PDB-7qd7:
TarM(Se)_G117R
Method: X-RAY DIFFRACTION / Resolution: 2.06 Å

PDB-7qh9:
TarM(Se)_G117R-4RboP
Method: X-RAY DIFFRACTION / Resolution: 2.689 Å

PDB-7qnt:
TarM(Se) native
Method: X-RAY DIFFRACTION / Resolution: 3.21 Å

PDB-8p1x:
TarM(Se)_G117R-UDP-glucose
Method: X-RAY DIFFRACTION / Resolution: 2.03 Å

PDB-8p20:
TarM(Se)_G117R-UDP-4RboP-glucose
Method: X-RAY DIFFRACTION / Resolution: 2.848 Å

Chemicals

ChemComp-CL:
Unknown entry

ChemComp-PO4:
PHOSPHATE ION

ChemComp-GOL:
GLYCEROL

ChemComp-1PE:
PENTAETHYLENE GLYCOL / precipitant*YM

ChemComp-HOH:
WATER

ChemComp-CWI:
[(2~{R},3~{S},4~{S})-2,3,4-tris(oxidanyl)-5-phosphonooxy-pentyl] [(2~{S},3~{R},4~{R})-2,3,4-tris(oxidanyl)-5-phosphonooxy-pentyl] hydrogen phosphate

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-BME:
BETA-MERCAPTOETHANOL

ChemComp-UPG:
URIDINE-5'-DIPHOSPHATE-GLUCOSE

ChemComp-PG4:
TETRAETHYLENE GLYCOL / precipitant*YM

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-BJT:
[(2~{R},3~{S},4~{S})-2-[(2~{S},3~{S},4~{R},5~{R},6~{S})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-3,4-bis(oxidanyl)-5-[oxidanyl-[(2~{R},3~{S},4~{S})-2,3,4-tris(oxidanyl)-5-[oxidanyl-[(2~{R},3~{S},4~{S})-2,3,4,5-tetrakis(oxidanyl)pentoxy]phosphoryl]oxy-pentoxy]phosphoryl]oxy-pentyl] [(2~{S},3~{R},4~{R})-2,3,4-tris(oxidanyl)-5-phosphonooxy-pentyl] hydrogen phosphate

ChemComp-UDP:
URIDINE-5'-DIPHOSPHATE / UDP*YM

Source
  • escherichia coli bl21(de3) (bacteria)
  • staphylococcus epidermidis (bacteria)
KeywordsTRANSFERASE / Staphylococcus epidermidis / glycosyltransferase / GT-B fold / alpha-O-glucose / wall teichoic acid / glycosylate alpha-O-glucose wall teichoic acid fold-B / wall teichoic acid glycosyltransferase / alpha-O-glucose.

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