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TitleNanobody inhibitors of Plexin-B1 identify allostery in plexin-semaphorin interactions and signaling.
Journal, issue, pagesJ. Biol. Chem., Vol. 299, Page 104740-104740, Year 2023
Publish dateSep 16, 2022 (structure data deposition date)
AuthorsCowan, R. / Trokter, M. / Oleksy, A. / Fedorova, M. / Sawmynaden, K. / Worzfeld, T. / Offermanns, S. / Matthews, D. / Carr, M.D. / Hall, G.
External linksJ. Biol. Chem. / PubMed:37088134
MethodsX-ray diffraction
Resolution2.15 - 2.95 Å
Structure data

PDB-8b3k:
Crystal structure of human Plexin-B1 (20-535) in the unbound state
Method: X-RAY DIFFRACTION / Resolution: 2.685 Å

PDB-8bb7:
Crystal structure of Mouse Plexin-B1 (20-535) in complex with VHH15
Method: X-RAY DIFFRACTION / Resolution: 2.95 Å

PDB-8bf4:
Crystal structure of Mouse Plexin-B1 (20-535) in complex with VHH15 and VHH14
Method: X-RAY DIFFRACTION / Resolution: 2.15 Å

Chemicals

ChemComp-CD:
Unknown entry

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-HOH:
WATER

ChemComp-CL:
Unknown entry

ChemComp-EDO:
1,2-ETHANEDIOL

Source
  • homo sapiens (human)
  • mus musculus (house mouse)
  • camelidae (mammal)
KeywordsSIGNALING PROTEIN / receptor / unbound / guidance / adherence / neurodevelopment / axonogenesis / Complex / inhibitor / VHH / nanobody / Plexin / semaphorin / allosteric

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