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TitleStructural studies of SALL family protein zinc finger cluster domains in complex with DNA reveal preferential binding to an AATA tetranucleotide motif.
Journal, issue, pagesJ. Biol. Chem., Vol. 298, Page 102607-102607, Year 2022
Publish dateJun 10, 2022 (structure data deposition date)
AuthorsRu, W. / Koga, T. / Wang, X. / Guo, Q. / Gearhart, M.D. / Zhao, S. / Murphy, M. / Kawakami, H. / Corcoran, D. / Zhang, J. ...Ru, W. / Koga, T. / Wang, X. / Guo, Q. / Gearhart, M.D. / Zhao, S. / Murphy, M. / Kawakami, H. / Corcoran, D. / Zhang, J. / Zhu, Z. / Yao, X. / Kawakami, Y. / Xu, C.
External linksJ. Biol. Chem. / PubMed:36257403
MethodsX-ray diffraction
Resolution2.45 - 2.723 Å
Structure data

PDB-7y3i:
Structure of DNA bound SALL4
Method: X-RAY DIFFRACTION / Resolution: 2.45 Å

PDB-7y3k:
Structure of SALL4 ZFC4 bound with 16 bp AT-rich dsDNA
Method: X-RAY DIFFRACTION / Resolution: 2.501 Å

PDB-7y3l:
Structure of SALL3 ZFC4 bound with 12 bp AT-rich dsDNA
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-7y3m:
Structure of SALL4 ZFC1 bound with 16 bp AT-rich dsDNA
Method: X-RAY DIFFRACTION / Resolution: 2.723 Å

Chemicals

ChemComp-ZN:
Unknown entry

ChemComp-HOH:
WATER

Source
  • homo sapiens (human)
  • synthetic construct (others)
KeywordsDNA/DNA BINDING PROTEIN / SALL4 / zinc finger / DNA BINDING PROTEIN / DNA-DNA BINDING PROTEIN complex / DNA BINDING PROTEIN/DNA / AT-rich DNA / DNA BINDING PROTEIN-DNA complex / SALL3 / DNA

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