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Structure paper

TitleImpact of distant peptide substrate residues on enzymatic activity of SlyD.
Journal, issue, pagesCell. Mol. Life Sci., Vol. 79, Page 138-138, Year 2022
Publish dateJun 22, 2021 (structure data deposition date)
AuthorsPazicky, S. / Werle, A.A. / Lei, J. / Low, C. / Weininger, U.
External linksCell. Mol. Life Sci. / PubMed:35184231
MethodsX-ray diffraction
Resolution1.7 - 2.8 Å
Structure data

PDB-7oxg:
ttSlyD FKBP domain with M8A pseudo-wild-type S2 peptide
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-7oxh:
ttSlyD with pseudo-wild-type S2 peptide
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-7oxi:
ttSlyD with W4A pseudo-wild-type S2 peptide
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-7oxj:
ttSlyD with M8A pseudo-wild-type S2 peptide
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-7oxk:
ttSlyD with W4K pseudo-wild-type S2 peptide
Method: X-RAY DIFFRACTION / Resolution: 2.8 Å

Chemicals

ChemComp-CL:
Unknown entry

ChemComp-IMD:
IMIDAZOLE

ChemComp-HOH:
WATER

ChemComp-PE4:
2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL / precipitant*YM

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-NI:
NICKEL (II) ION

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-PG4:
TETRAETHYLENE GLYCOL / precipitant*YM

ChemComp-MG:
Unknown entry

Source
  • thermus thermophilus (strain atcc 27634 / dsm 579 / hb8) (bacteria)
  • escherichia coli (strain k12) (bacteria)
  • synthetic construct (others)
KeywordsISOMERASE / FKBP / chaperone

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