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Structure paper

TitleStructural Characterization of Diazabicyclooctane beta-Lactam "Enhancers" in Complex with Penicillin-Binding Proteins PBP2 and PBP3 of Pseudomonas aeruginosa.
Journal, issue, pagesMbio, Vol. 12, Year 2021
Publish dateOct 24, 2020 (structure data deposition date)
AuthorsRajavel, M. / Kumar, V. / Nguyen, H. / Wyatt, J. / Marshall, S.H. / Papp-Wallace, K.M. / Deshpande, P. / Bhavsar, S. / Yeole, R. / Bhagwat, S. ...Rajavel, M. / Kumar, V. / Nguyen, H. / Wyatt, J. / Marshall, S.H. / Papp-Wallace, K.M. / Deshpande, P. / Bhavsar, S. / Yeole, R. / Bhagwat, S. / Patel, M. / Bonomo, R.A. / van den Akker, F.
External linksMbio / PubMed:33593978
MethodsX-ray diffraction
Resolution2.089 - 2.869 Å
Structure data

PDB-7kis:
Crystal structure of Pseudomonas aeruginosa PBP2 in complex with WCK 5153
Method: X-RAY DIFFRACTION / Resolution: 2.869 Å

PDB-7kit:
Crystal structure of Pseudomonas aeruginosa PBP3 in complex with WCK 4234
Method: X-RAY DIFFRACTION / Resolution: 2.089 Å

PDB-7kiv:
Crystal structure of Pseudomonas aeruginosa PBP3 in complex with avibactam
Method: X-RAY DIFFRACTION / Resolution: 2.389 Å

PDB-7kiw:
Crystal structure of Pseudomonas aeruginosa PBP3 in complex with zidebactam
Method: X-RAY DIFFRACTION / Resolution: 2.49 Å

Chemicals

ChemComp-C9D:
(2S,5R)-1-formyl-N'-[(3R)-pyrrolidine-3-carbonyl]-5-[(sulfooxy)amino]piperidine-2-carbohydrazide

ChemComp-CL:
Unknown entry / Chloride

ChemComp-HOH:
WATER / Water

ChemComp-C8Y:
(2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carbonitrile

ChemComp-NXL:
(2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide / antibiotic, inhibitor*YM / Avibactam

ChemComp-C8V:
(2S,5R)-1-formyl-N'-[(3R)-piperidine-3-carbonyl]-5-[(sulfooxy)amino]piperidine-2-carbohydrazide

Source
  • pseudomonas aeruginosa (bacteria)
  • pseudomonas aeruginosa (strain atcc 15692 / dsm 22644 / cip 104116 / jcm 14847 / lmg 12228 / 1c / prs 101 / pao1) (bacteria)
KeywordsHYDROLASE/Inhibitor/Antibiotic / Inhibitor / cell wall / antibiotic resistance / HYDROLASE / HYDROLASE-Inhibitor-Antibiotic complex

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