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Structure paper

TitlePhotosynthetic Phosphoribulokinase Structures: Enzymatic Mechanisms and the Redox Regulation of the Calvin-Benson-Bassham Cycle.
Journal, issue, pagesPlant Cell, Vol. 32, Page 1556-1573, Year 2020
Publish dateJul 5, 2019 (structure data deposition date)
AuthorsYu, A. / Xie, Y. / Pan, X. / Zhang, H. / Cao, P. / Su, X. / Chang, W. / Li, M.
External linksPlant Cell / PubMed:32102842
MethodsX-ray diffraction
Resolution2.29 - 3.5 Å
Structure data

PDB-6kev:
Reduced phosphoribulokinase from Synechococcus elongatus PCC 7942 complexed with adenosine diphosphate and glucose 6-phosphate
Method: X-RAY DIFFRACTION / Resolution: 2.5061389246 Å

PDB-6kew:
Crystal structure of oxidized phosphoribulokinase from Arabidopsis thaliana
Method: X-RAY DIFFRACTION / Resolution: 2.29 Å

PDB-6kex:
Crystal structure of reduced phosphoribulokinase from Arabidopsis thaliana
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-6kez:
Crystal structure of GAPDH/CP12/PRK complex from Arabidopsis thaliana
Method: X-RAY DIFFRACTION / Resolution: 3.5 Å

Chemicals

ChemComp-ADP:
ADENOSINE-5'-DIPHOSPHATE / ADP, energy-carrying molecule*YM

ChemComp-G6P:
6-O-phosphono-alpha-D-glucopyranose

ChemComp-DTT:
2,3-DIHYDROXY-1,4-DITHIOBUTANE

ChemComp-HOH:
WATER

ChemComp-NAD:
NICOTINAMIDE-ADENINE-DINUCLEOTIDE / NAD*YM

Source
  • synechococcus elongatus (strain pcc 7942) (bacteria)
  • arabidopsis thaliana (thale cress)
KeywordsTRANSFERASE / phosphoribulokinase / adenosine diphosphate / glucose 6-phosphate / phosphoribulokinase oxidized / phosphoribulokinase reduced / OXIDOREDUCTASE/TRANSFERASE/PROTEIN BINDING / glyceraldehyde-2-phosphate dehydrogenase / CP12 chloroplast / OXIDOREDUCTASE-TRANSFERASE-PROTEIN BINDING complex

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