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Structure paper

TitleMammalian ALKBH1 serves as an N6-mA demethylase of unpairing DNA.
Journal, issue, pagesCell Res., Vol. 30, Page 197-210, Year 2020
Publish dateOct 22, 2018 (structure data deposition date)
AuthorsZhang, M. / Yang, S. / Nelakanti, R. / Zhao, W. / Liu, G. / Li, Z. / Liu, X. / Wu, T. / Xiao, A. / Li, H.
External linksCell Res. / PubMed:32051560
MethodsX-ray diffraction
Resolution2.4 - 2.593 Å
Structure data

PDB-6ima:
Crystal Structure of ALKBH1 without alpha-1 (N37-C369)
Method: X-RAY DIFFRACTION / Resolution: 2.593 Å

PDB-6imc:
Crystal Structure of ALKBH1 in complex with Mn(II) and N-Oxalylglycine
Method: X-RAY DIFFRACTION / Resolution: 2.51 Å

PDB-6ksf:
Crystal Structure of ALKBH1 bound to 21-mer DNA bulge
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

Chemicals

ChemComp-CIT:
CITRIC ACID

ChemComp-HOH:
WATER

ChemComp-MN:
Unknown entry

ChemComp-OGA:
N-OXALYLGLYCINE / inhibitor*YM

ChemComp-CL:
Unknown entry

ChemComp-SIN:
SUCCINIC ACID

ChemComp-XL3:
propane-1-thiol

Source
  • mus musculus (house mouse)
  • homo sapiens (human)
KeywordsGENE REGULATION / double-stranded beta helix / DNA methylation / complex / demethylase

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