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Structure paper

TitleHORMA Domain Proteins and a Trip13-like ATPase Regulate Bacterial cGAS-like Enzymes to Mediate Bacteriophage Immunity.
Journal, issue, pagesMol. Cell, Vol. 77, Page 709-, Year 2020
Publish dateJun 6, 2019 (structure data deposition date)
AuthorsYe, Q. / Lau, R.K. / Mathews, I.T. / Birkholz, E.A. / Watrous, J.D. / Azimi, C.S. / Pogliano, J. / Jain, M. / Corbett, K.D.
External linksMol. Cell / PubMed:31932165
MethodsX-ray diffraction
Resolution1.47 - 2.64 Å
Structure data

PDB-6p80:
Structure of E. coli MS115-1 CdnC + ATP
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-6p82:
Structure of P. aeruginosa ATCC27853 CdnD, Apo form 1
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

PDB-6p8j:
Structure of P. aeruginosa ATCC27853 CdnD D62N/D64N mutant bound to ATP
Method: X-RAY DIFFRACTION / Resolution: 1.47 Å

PDB-6p8o:
Structure of P. aeruginosa ATCC27853 HORMA2-deltaC
Method: X-RAY DIFFRACTION / Resolution: 1.604 Å

PDB-6p8p:
Structure of P. aeruginosa ATCC27853 HORMA1
Method: X-RAY DIFFRACTION / Resolution: 1.635 Å

PDB-6p8r:
Structure of P. aeruginosa ATCC27853 HORMA2
Method: X-RAY DIFFRACTION / Resolution: 2.141 Å

PDB-6p8s:
Structure of P. aeruginosa ATCC27853 HORMA1:HORMA2:Peptide 1 complex
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-6p8u:
Structure of P. aeruginosa ATCC27853 CdnD:HORMA2:Peptide 1 complex
Method: X-RAY DIFFRACTION / Resolution: 1.893 Å

PDB-6p8v:
Structure of E. coli MS115-1 HORMA:CdnC:Trip13 complex
Method: X-RAY DIFFRACTION / Resolution: 2.64 Å

PDB-6pb3:
Structure of Rhizobiales Trip13
Method: X-RAY DIFFRACTION / Resolution: 2.048 Å

PDB-6u7b:
Structure of E. coli MS115-1 CdnC:HORMA-deltaN complex
Method: X-RAY DIFFRACTION / Resolution: 2.09 Å

Chemicals

ChemComp-ATP:
ADENOSINE-5'-TRIPHOSPHATE / ATP, energy-carrying molecule*YM

ChemComp-MG:
Unknown entry

ChemComp-CL:
Unknown entry

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

ChemComp-HOH:
WATER

ChemComp-SO4:
SULFATE ION

ChemComp-NI:
NICKEL (II) ION

ChemComp-CA:
Unknown entry

ChemComp-PO4:
PHOSPHATE ION

ChemComp-ACT:
ACETATE ION

ChemComp-1PE:
PENTAETHYLENE GLYCOL / precipitant*YM

ChemComp-AMP:
ADENOSINE MONOPHOSPHATE / AMP*YM

Source
  • escherichia coli ms 115-1 (bacteria)
  • pseudomonas aeruginosa (bacteria)
  • escherichia coli (E. coli)
  • marine metagenome (others)
KeywordsPROTEIN BINDING / Second-messenger signaling / CD-NTase / cGAS / SIGNALING PROTEIN / HORMA domain / closure motif / ATPase / Remodeller / TRIP13 / Pch2

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