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Structure paper

TitleHigh-Throughput PIXE as an Essential Quantitative Assay for Accurate Metalloprotein Structural Analysis: Development and Application.
Journal, issue, pagesJ. Am. Chem. Soc., Vol. 142, Page 185-197, Year 2020
Publish dateJan 9, 2019 (structure data deposition date)
AuthorsGrime, G.W. / Zeldin, O.B. / Snell, M.E. / Lowe, E.D. / Hunt, J.F. / Montelione, G.T. / Tong, L. / Snell, E.H. / Garman, E.F.
External linksJ. Am. Chem. Soc. / PubMed:31794207
MethodsX-ray diffraction
Resolution2.1 - 3 Å
Structure data

PDB-6nlr:
Crystal structure of the putative histidinol phosphatase hisK from Listeria monocytogenes with trinuclear metals determined by PIXE revealing sulphate ion in active site. Based on PIXE analysis and original date from 3DCP
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-6oby:
The nucleotide-binding protein AF_226 in complex with ADP from Archaeoglobus fulgidus with Co found by PIXE. Based on 3KB1.
Method: X-RAY DIFFRACTION / Resolution: 2.87 Å

PDB-6oe2:
X-Ray Structure of the C-terminal domain (277-440) of Putative chitobiase from Bacteroides thetaiotaomicron. Northeast Structural Genomics Consortium Target BtR324A. Re-refinement of 3GGL with correct metal Mn replacing Zn. New metal confirmed with PIXE analysis of original sample.
Method: X-RAY DIFFRACTION / Resolution: 3 Å

Chemicals

ChemComp-MN:
Unknown entry

ChemComp-CO:
Unknown entry

ChemComp-SO4:
SULFATE ION

ChemComp-FE:
Unknown entry

ChemComp-CA:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-ADP:
ADENOSINE-5'-DIPHOSPHATE / ADP, energy-carrying molecule*YM

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

Source
  • listeria monocytogenes serotype 4b str. h7858 (bacteria)
  • archaeoglobus fulgidus (archaea)
  • bacteroides thetaiotaomicron (bacteria)
KeywordsHYDROLASE / HISTIDINOL PHOSPHATASE / HISK / HISTIDINE BIOSYNTHESIS / NESG / LMR14 / PIXE / TRINUCLEAR / SULPHATE / METAL TRANSPORT / ALPHA-BETA PROTEIN / BTR324A / Q8A9F0_BACTN / Bacteroides thetaiotaomicron / BT_0865 / PSI-2 / Protein Structure Initiative / Northeast Structural Genomics Consortium / Structural Genomics

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