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Structure paper

TitleStructure and Chemical Reaction Mechanism of LigU, an Enzyme That Catalyzes an Allylic Isomerization in the Bacterial Degradation of Lignin.
Journal, issue, pagesBiochemistry, Vol. 58, Page 3494-3503, Year 2019
Publish dateMay 23, 2019 (structure data deposition date)
AuthorsHogancamp, T.N. / Cory, S.A. / Barondeau, D.P. / Raushel, F.M.
External linksBiochemistry / PubMed:31339729
MethodsX-ray diffraction
Resolution1.62 - 2.02 Å
Structure data

PDB-6p3h:
Crystal structure of LigU(K66M) bound to substrate
Method: X-RAY DIFFRACTION / Resolution: 1.62 Å

PDB-6p3j:
Crystal structure of LigU
Method: X-RAY DIFFRACTION / Resolution: 2.02 Å

PDB-6p3k:
Crystal structure of LigU(C100S)
Method: X-RAY DIFFRACTION / Resolution: 1.88 Å

Chemicals

ChemComp-NQM:
(1E)-4-oxobut-1-ene-1,2,4-tricarboxylic acid

ChemComp-CL:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-CA:
Unknown entry

ChemComp-NA:
Unknown entry

Source
  • novosphingobium sp. (strain ka1) (bacteria)
KeywordsISOMERASE / Lignin degradation / protocatechuate 4 / 5-cleavage pathway / PrpF superfamily / (4E)-oxalomesaconate isomerase mechanism

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