PDB-5nh4: Crystal structure of xylose isomerase from Piromyces E2 in complex with one Mg2+ ions and glycerol Method: X-RAY DIFFRACTION / Resolution: 1.8 Å
PDB-5nh5: Crystal structure of native xylose isomerase from Piromyces E2 Method: X-RAY DIFFRACTION / Resolution: 1.8 Å
PDB-5nh6: Crystal structure of xylose isomerase from Piromyces E2 Complexed with one Mg2+ ion and xylitol Method: X-RAY DIFFRACTION / Resolution: 1.75 Å
PDB-5nh7: Crystal structure of xylose isomerase from Piromyces E2 in complex with two Mg2+ ions and xylose Method: X-RAY DIFFRACTION / Resolution: 1.9 Å
PDB-5nh8: Crystal structure of xylose isomerase from Piromyces E2 in complex with two Ca2+ ions and xylose Method: X-RAY DIFFRACTION / Resolution: 1.86 Å
PDB-5nh9: Crystal structure of xylose isomerase from Piromyces E2 in complex with two Mn2+ ions and xylose Method: X-RAY DIFFRACTION / Resolution: 2.08 Å
PDB-5nha: Crystal structure of xylose isomerase from Piromyces sp. E2 in complex with two Mn2+ ions and sorbitol Method: X-RAY DIFFRACTION / Resolution: 1.8 Å
PDB-5nhb: Crystal structure of xylose isomerase from Piromyces E2 in complex with two Fe2+ ions Method: X-RAY DIFFRACTION / Resolution: 2.4 Å
PDB-5nhc: Crystal structure of xylose isomerase from Piromyces E2 in complex with two Co2+ ions and xylulose Method: X-RAY DIFFRACTION / Resolution: 1.93 Å
PDB-5nhd: Crystal structure of xylose isomerase from Piromyces E2 in complex with 2 Ni2+ ions and xylose Method: X-RAY DIFFRACTION / Resolution: 1.8 Å
PDB-5nhe: Crystal structure of xylose isomerase from Piromyces E2 in complex with two Cd2+ ions and xylose Method: X-RAY DIFFRACTION / Resolution: 1.86 Å
PDB-5nhm: Crystal structure of apo xylose isomerase from Piromyces E2 Method: X-RAY DIFFRACTION / Resolution: 1.67 Å
In the structure databanks used in Yorodumi, some data are registered as the other names, "COVID-19 virus" and "2019-nCoV". Here are the details of the virus and the list of structure data.
Jan 31, 2019. EMDB accession codes are about to change! (news from PDBe EMDB page)
EMDB accession codes are about to change! (news from PDBe EMDB page)
The allocation of 4 digits for EMDB accession codes will soon come to an end. Whilst these codes will remain in use, new EMDB accession codes will include an additional digit and will expand incrementally as the available range of codes is exhausted. The current 4-digit format prefixed with “EMD-” (i.e. EMD-XXXX) will advance to a 5-digit format (i.e. EMD-XXXXX), and so on. It is currently estimated that the 4-digit codes will be depleted around Spring 2019, at which point the 5-digit format will come into force.
The EM Navigator/Yorodumi systems omit the EMD- prefix.
Related info.:Q: What is EMD? / ID/Accession-code notation in Yorodumi/EM Navigator