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TitlePlasticity in PYD assembly revealed by cryo-EM structure of the PYD filament of AIM2.
Journal, issue, pagesCell Discov, Vol. 1, Page 15013-, Year 2015
Publish dateJun 23, 2015
AuthorsAlvin Lu / Yang Li / Qian Yin / Jianbin Ruan / Xiong Yu / Edward Egelman / Hao Wu /
PubMed AbstractAbsent in melanoma 2 (AIM2) is an essential cytosolic double-stranded DNA receptor that assembles with the adaptor, apoptosis-associated speck-like protein containing a caspase recruitment domain ...Absent in melanoma 2 (AIM2) is an essential cytosolic double-stranded DNA receptor that assembles with the adaptor, apoptosis-associated speck-like protein containing a caspase recruitment domain (ASC), and caspase-1 to form the AIM2 inflammasome, which leads to proteolytic maturation of cytokines and pyroptotic cell death. AIM2 contains an N-terminal Pyrin domain (PYD) that interacts with ASC through PYD/PYD interactions and nucleates ASC filament formation. To elucidate the molecular basis of AIM2-induced ASC polymerization, we generated AIM2 filaments fused to green fluorescent protein (GFP) and determined its cryo-electron microscopic (cryo-EM) structure. The map showed distinct definition of helices, allowing fitting of the crystal structure. Surprisingly, the GFP-AIM2 filament is a 1-start helix with helical parameters distinct from those of the 3-start ASC filament. However, despite the apparent symmetry difference, helical net and detailed interface analyses reveal minimal changes in subunit packing. GFP-AIM2 nucleated ASC filament formation in comparable efficiency as untagged AIM2, suggesting assembly plasticity in both AIM2 and ASC. The DNA-binding domain of AIM2 is able to form AIM2/DNA filaments, within which the AIM2 is brought into proximity to template ASC filament assembly. Because ASC is able to interact with many PYD-containing receptors for the formation of inflammasomes, the observed structural plasticity may be critically important for this versatility in the PYD/PYD interactions.
External linksCell Discov / PubMed:26583071 / PubMed Central
MethodsEM (helical sym.)
Resolution5.0 Å
Structure data

EMDB-9064, PDB-6mb2:
Cryo-EM structure of the PYD filament of AIM2
Method: EM (helical sym.) / Resolution: 5.0 Å

Source
  • homo sapiens (human)
  • aequorea victoria (jellyfish)
KeywordsIMMUNE SYSTEM / Filament / higher order / innate immunity / inflammasome

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