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Structure paper

TitleEntropic Enhancement of Protein-DNA Affinity by Oxygen-to-Sulfur Substitution in DNA Phosphate.
Journal, issue, pagesBiophys. J., Vol. 109, Page 1026-1037, Year 2015
Publish dateJan 6, 2015 (structure data deposition date)
AuthorsZandarashvili, L. / Nguyen, D. / Anderson, K.M. / White, M.A. / Gorenstein, D.G. / Iwahara, J.
External linksBiophys. J. / PubMed:26331260
MethodsX-ray diffraction
Resolution2.69 - 2.701 Å
Structure data

PDB-4xic:
ANTPHD WITH 15BP di-thioate modified DNA DUPLEX
Method: X-RAY DIFFRACTION / Resolution: 2.69 Å

PDB-4xid:
AntpHD with 15bp DNA duplex
Method: X-RAY DIFFRACTION / Resolution: 2.701 Å

Chemicals

ChemComp-NI:
NICKEL (II) ION

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

ChemComp-HOH:
WATER

Source
  • drosophila melanogaster (fruit fly)
  • unidentified (others)
KeywordsTranscription Regulator/DNA / DNA Binding / Methylated DNA / ZINC FINGER / TRANSCRIPTION / Transcription Regulator-DNA complex / HOMEODOMAIN / DNA-BINDING PROTEIN / COMPLEX (HOMEODOMAIN-DNA) / TRANSCRIPTION-DNA COMPLEX

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