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TitleStructural and Thermodynamic Insights into Chitooligosaccharide Binding to Human Cartilage Chitinase 3-like Protein 2 (CHI3L2 or YKL-39).
Journal, issue, pagesJ. Biol. Chem., Vol. 290, Page 2617-2629, Year 2015
Publish dateApr 1, 2014 (structure data deposition date)
AuthorsRanok, A. / Wongsantichon, J. / Robinson, R.C. / Suginta, W.
External linksJ. Biol. Chem. / PubMed:25477513
MethodsX-ray diffraction
Resolution1.64 - 2.48 Å
Structure data

PDB-4p8u:
The crystal structures of YKL-39 in the absence of chitooligosaccharides was solved to resolutions of 2.4 angstrom
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-4p8v:
The crystal structures of YKL-39 in the presence of chitooligosaccharides (GlcNAc2) were solved to resolutions of 1.5 angstrom
Method: X-RAY DIFFRACTION / Resolution: 1.64 Å

PDB-4p8w:
The crystal structures of YKL-39 in the presence of chitooligosaccharides (GlcNAc4) were solved to resolutions of 1.9 angstrom
Method: X-RAY DIFFRACTION / Resolution: 1.87 Å

PDB-4p8x:
The crystal structures of YKL-39 in the presence of chitooligosaccharides (GlcNAc6) were solved to resolutions of 2.48 angstrom
Method: X-RAY DIFFRACTION / Resolution: 2.48 Å

Chemicals

ChemComp-SO4:
SULFATE ION

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-HOH:
WATER

Source
  • homo sapiens (human)
KeywordsSUGAR BINDING PROTEIN / chitinase 3-like protein 2 / human YKL-39 / family-18 chitinase

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