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Structure paper

TitleArginine ADP-ribosylation mechanism based on structural snapshots of iota-toxin and actin complex
Journal, issue, pagesProc. Natl. Acad. Sci. USA, Vol. 110, Page 4267-4272, Year 2013
Publish dateSep 5, 2012 (structure data deposition date)
AuthorsTsurumura, T. / Tsumori, Y. / Qiu, H. / Oda, M. / Sakurai, J. / Nagahama, M. / Tsuge, H.
External linksProc. Natl. Acad. Sci. USA / PubMed:23382240
MethodsX-ray diffraction
Resolution1.75 - 2.71 Å
Structure data

PDB-4gy2:
Crystal structure of apo-Ia-actin complex
Method: X-RAY DIFFRACTION / Resolution: 2.71 Å

PDB-4h03:
Crystal structure of NAD+-Ia-actin complex
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-4h0t:
Crystal structure of Ia-ADPR-actin complex
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-4h0v:
Crystal structure of NAD+-Ia(E378S)-actin complex
Method: X-RAY DIFFRACTION / Resolution: 2.03 Å

PDB-4h0x:
Crystal structure of NAD+-Ia(E380A)-actin complex
Method: X-RAY DIFFRACTION / Resolution: 2.33 Å

PDB-4h0y:
Crystal structure of NAD+-Ia(E380S)-actin complex
Method: X-RAY DIFFRACTION / Resolution: 1.94 Å

Chemicals

ChemComp-PO4:
PHOSPHATE ION

ChemComp-CA:
Unknown entry

ChemComp-ATP:
ADENOSINE-5'-TRIPHOSPHATE / ATP, energy-carrying molecule*YM

ChemComp-LAR:
LATRUNCULIN A / toxin*YM

ChemComp-HOH:
WATER

ChemComp-NAD:
NICOTINAMIDE-ADENINE-DINUCLEOTIDE / NAD*YM

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-AR6:
[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL

Source
  • clostridium perfringens (bacteria)
  • oryctolagus cuniculus (rabbit)
KeywordsTOXIN/STRUCTURAL PROTEIN / ADP-ribosyltransferase / TOXIN-STRUCTURAL PROTEIN complex

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