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Structure paper

TitleRotation mechanism of Enterococcus hirae V(1)-ATPase based on asymmetric crystal structures
Journal, issue, pagesNature, Vol. 493, Page 703-707, Year 2013
Publish dateApr 3, 2012 (structure data deposition date)
AuthorsArai, S. / Saijo, S. / Suzuki, K. / Mizutani, K. / Kakinuma, Y. / Ishizuka-Katsura, Y. / Ohsawa, N. / Terada, T. / Shirouzu, M. / Yokoyama, S. ...Arai, S. / Saijo, S. / Suzuki, K. / Mizutani, K. / Kakinuma, Y. / Ishizuka-Katsura, Y. / Ohsawa, N. / Terada, T. / Shirouzu, M. / Yokoyama, S. / Iwata, S. / Yamato, I. / Murata, T.
External linksNature / PubMed:23334411
MethodsX-ray diffraction
Resolution2.172 - 3.9 Å
Structure data

PDB-3vr2:
Crystal structure of nucleotide-free A3B3 complex from Enterococcus hirae V-ATPase [eA3B3]
Method: X-RAY DIFFRACTION / Resolution: 2.8 Å

PDB-3vr3:
Crystal structure of AMP-PNP bound A3B3 complex from Enterococcus hirae V-ATPase [bA3B3]
Method: X-RAY DIFFRACTION / Resolution: 3.4 Å

PDB-3vr4:
Crystal structure of Enterococcus hirae V1-ATPase [eV1]
Method: X-RAY DIFFRACTION / Resolution: 2.172 Å

PDB-3vr5:
Crystal structure of nucleotide-free Enterococcus hirae V1-ATPase [eV1(L)]
Method: X-RAY DIFFRACTION / Resolution: 3.9 Å

PDB-3vr6:
Crystal structure of AMP-PNP bound Enterococcus hirae V1-ATPase [bV1]
Method: X-RAY DIFFRACTION / Resolution: 2.68 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-ANP:
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER / AMP-PNP, energy-carrying molecule analogue*YM

ChemComp-MG:
Unknown entry

ChemComp-GOL:
GLYCEROL

ChemComp-CL:
Unknown entry

ChemComp-B3P:
2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL / pH buffer*YM

Source
  • enterococcus hirae (bacteria)
KeywordsHYDROLASE / V-ATPase / Enterococcus hirae / Rotary motor / P-loop / Na(+)-ATPase / ATP Binding

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