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Structure paper

TitleThe Tail of KdsC: CONFORMATIONAL CHANGES CONTROL THE ACTIVITY OF A HALOACID DEHALOGENASE SUPERFAMILY PHOSPHATASE.
Journal, issue, pagesJ. Biol. Chem., Vol. 284, Page 30594-30603, Year 2009
Publish dateSep 10, 2007 (structure data deposition date)
AuthorsBiswas, T. / Yi, L. / Aggarwal, P. / Wu, J. / Rubin, J.R. / Stuckey, J.A. / Woodard, R.W. / Tsodikov, O.V.
External linksJ. Biol. Chem. / PubMed:19726684
MethodsX-ray diffraction
Resolution1.4 - 3.06 Å
Structure data

PDB-2r8e:
Crystal structure of YrbI from Escherichia coli in complex with Mg
Method: X-RAY DIFFRACTION / Resolution: 1.4 Å

PDB-2r8x:
Crystal structure of YrbI phosphatase from Escherichia coli
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-2r8y:
Crystal structure of YrbI phosphatase from Escherichia coli in a complex with Ca
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-2r8z:
Crystal structure of YrbI phosphatase from Escherichia coli in complex with a phosphate and a calcium ion
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-3hyc:
Crystal structure of E. coli phosphatase YrbI, with Mg, tetragonal form
Method: X-RAY DIFFRACTION / Resolution: 3.06 Å

PDB-3i6b:
Crystal structure of YrbI lacking the last 8 residues, in complex with Kdo and inorganic phosphate
Method: X-RAY DIFFRACTION / Resolution: 2.49 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-CL:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-CA:
Unknown entry

ChemComp-PO4:
PHOSPHATE ION

ChemComp-KDO:
3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid

Source
  • escherichia coli o6 (bacteria)
  • escherichia coli (E. coli)
KeywordsHYDROLASE / Phosphatase / YrbI / divalent metal / HAD superfamily / KDO 8-P / Lipopolysaccharide biosynthesis / Magnesium / phosphatase KDO8-P / ca / KDO8-P / phosphate / KdsC / Kdo

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