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TitleEvidence that Family 35 Carbohydrate Binding Modules Display Conserved Specificity But Divergent Function.
Journal, issue, pagesProc. Natl. Acad. Sci. USA, Vol. 106, Page 3065-, Year 2009
Publish dateAug 5, 2008 (structure data deposition date)
AuthorsMontanier, C. / Van Bueren, A.L. / Dumon, C. / Flint, J.E. / Correia, M.A. / Prates, J.A. / Firbank, S.J. / Lewis, R.J. / Grondin, G.G. / Ghinet, M.G. ...Montanier, C. / Van Bueren, A.L. / Dumon, C. / Flint, J.E. / Correia, M.A. / Prates, J.A. / Firbank, S.J. / Lewis, R.J. / Grondin, G.G. / Ghinet, M.G. / Gloster, T.M. / Herve, C. / Knox, J.P. / Talbot, B.G. / Turkenburg, J.P. / Kerovuo, J. / Brzezinski, R. / Fontes, C.M.G.A. / Davies, G.J. / Boraston, A.B. / Gilbert, H.J.
External linksProc. Natl. Acad. Sci. USA / PubMed:19218457
MethodsX-ray diffraction
Resolution1.05 - 1.95 Å
Structure data

PDB-2vzp:
Atomic Resolution Structure of the C-terminal CBM35 from Amycolatopsis orientalis exo-chitosanase CsxA
Method: X-RAY DIFFRACTION / Resolution: 1.05 Å

PDB-2vzq:
C-terminal CBM35 from Amycolatopsis orientalis exo-chitosanase CsxA in complex with digalacturonic acid
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-2vzr:
C-terminal CBM35 from Amycolatopsis orientalis exo-chitosanase CsxA in complex with glucuronic acid
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-2w1w:
Native structure of a family 35 carbohydrate binding module from Clostridium thermocellum
Method: X-RAY DIFFRACTION / Resolution: 1.55 Å

PDB-2w3j:
Structure of a family 35 carbohydrate binding module from an environmental isolate
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-2w46:
CBM35 from Cellvibrio japonicus Abf62
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-2w47:
Clostridium thermocellum CBM35 in complex with delta-4,5- anhydrogalacturonic acid
Method: X-RAY DIFFRACTION / Resolution: 1.4 Å

PDB-2w87:
Xyl-CBM35 in complex with glucuronic acid containing disaccharide.
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

Chemicals

ChemComp-CA:
Unknown entry

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

ChemComp-NA:
Unknown entry

ChemComp-GCU:
alpha-D-glucopyranuronic acid

ChemComp-GOL:
GLYCEROL

ChemComp-PO4:
PHOSPHATE ION


ChemComp, No image

ChemComp-UNL:
Unknown ligand

Source
  • amycolatopsis orientalis (bacteria)
  • clostridium thermocellum (bacteria)
  • uncultured bacterium (environmental samples)
  • cellvibrio japonicus (bacteria)
KeywordsHYDROLASE / CBM / FAMILY 35 / CSXA / GLUCURONIC ACID / DIGALACTURONIC ACID / CALCIUM / URONIC ACID SUGARS / CLOSTRIDIUM THERMOCELLUM / CARBOHYDRATE BINDING MODULE / SUGAR BINDING PROTEIN / SUGAR-BINDING PROTEIN / ARABINOFURANOSIDASE / PLANT CELL WALL DEGRADATION / CARBOHYDRATE PROTEIN BINDING / XYLAN / CMB35

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