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Structure paper

TitleTransition from Nonspecific to Specific DNA Interactions along the Substrate-Recognition Pathway of Dam Methyltransferase.
Journal, issue, pagesCell(Cambridge,Mass. ), Vol. 121, Page 349-361, Year 2005
Publish dateDec 30, 2004 (structure data deposition date)
AuthorsHorton, J.R. / Liebert, K. / Hattman, S. / Jeltsch, A. / Cheng, X.
External linksCell(Cambridge,Mass. ) / PubMed:15882618
MethodsX-ray diffraction
Resolution2.29 - 3.09 Å
Structure data

PDB-1yf3:
T4Dam in Complex with AdoHcy and 13-mer Oligonucleotide Making Non- and Semi-specific (~1/4) Contact
Method: X-RAY DIFFRACTION / Resolution: 2.29 Å

PDB-1yfj:
T4Dam in Complex with AdoHcy and 15-mer Oligonucleotide Showing Semi-specific and Specific Contact
Method: X-RAY DIFFRACTION / Resolution: 2.69 Å

PDB-1yfl:
T4Dam in Complex with Sinefungin and 16-mer Oligonucleotide Showing Semi-specific and Specific Contact and Flipped Base
Method: X-RAY DIFFRACTION / Resolution: 3.09 Å

Chemicals

ChemComp-SAH:
S-ADENOSYL-L-HOMOCYSTEINE

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-CL:
Unknown entry

ChemComp-CA:
Unknown entry

ChemComp-SFG:
SINEFUNGIN

Source
  • enterobacteria phage t4 (virus)
KeywordsTransferase/DNA / T4DAM / METHYLTRANSFERASE / DNA / Transferase-DNA COMPLEX / PROTEIN-DNA COMPLEX / BASE-FLIPPING

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