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Structure paper

TitleThe Crystal structure of fragment double-D from cross-linked lamprey fibrin reveals isopeptide linkages across an unexpected D-D interface
Journal, issue, pagesBiochemistry, Vol. 41, Page 15610-15617, Year 2002
Publish dateNov 12, 2002 (structure data deposition date)
AuthorsYang, Z. / Pandi, L. / Doolittle, R.F.
External linksBiochemistry / PubMed:12501189
MethodsX-ray diffraction
Resolution2.9 - 4.5 Å
Structure data

PDB-1n73:
Fibrin D-Dimer, Lamprey complexed with the PEPTIDE LIGAND: GLY-HIS-ARG-PRO-AMIDE
Method: X-RAY DIFFRACTION / Resolution: 2.9 Å

PDB-1n86:
Crystal structure of human D-dimer from cross-linked fibrin complexed with GPR and GHRPLDK peptide ligands.
Method: X-RAY DIFFRACTION / Resolution: 3.2 Å

PDB-1n8e:
Fragment Double-D from Human Fibrin
Method: X-RAY DIFFRACTION / Resolution: 4.5 Å

Chemicals

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-CA:
Unknown entry

ChemComp-NDG:
2-acetamido-2-deoxy-alpha-D-glucopyranose

ChemComp-MAN:
alpha-D-mannopyranose

Source
  • petromyzon marinus (sea lamprey)
  • homo sapiens (human)
KeywordsBLOOD CLOTTING / isopeptide cross-linked chains; protein-peptide complex / cross-linked fibrin / protein-peptide complex / D:D interfaces; crystal packing

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