[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 25 items for (author: zumer & k)

EMDB-54196:
Activated elongation complex with IWS1 and ELOF1 - MAP2 - focused classification of particles with IWS1 core without ELOF1
Method: single particle / : Walshe JL, Cramer P

EMDB-54197:
Activated elongation complex with IWS1 and ELOF1 - MAP3 - focused classification of particles with ELOF1
Method: single particle / : Walshe JL, Cramer P

EMDB-54201:
Activated elongation complex with IWS1 and ELOF1 - MAP4 - focused classification of PAF1 LEO1
Method: single particle / : Walshe JL, Cramer P

EMDB-54202:
Activated elongation complex with IWS1 and ELOF1 - MAP5 - focused classification of SPT6 tSH2 domain and CDC73
Method: single particle / : Walshe JL, Cramer P

EMDB-54203:
Activated elongation complex with IWS1 and ELOF1 - MAP6 - focused classification of CTR9 and WDR61
Method: single particle / : Walshe JL, Cramer P

EMDB-54205:
Activated elongation complex with IWS1 and ELOF1 - MAP7 - focused classification of SPT6
Method: single particle / : Walshe JL, Cramer P

EMDB-54206:
Activated elongation complex with IWS1 and ELOF1 - MAP8 - focused classification of ELOF1
Method: single particle / : Walshe JL, Cramer P

EMDB-54207:
Activated elongation complex with IWS1 and ELOF1 - MAP9 - focused classification of IWS1
Method: single particle / : Walshe JL, Cramer P

EMDB-54208:
Activated elongation complex with IWS1 and ELOF1 - MAP10 - Pol II local refinement of PAF1 and LEO1 containing particles
Method: single particle / : Walshe JL, Cramer P

EMDB-54209:
Activated elongation complex with IWS1 and ELOF1 - MAP11 - Pol II local refinement of CTR9 containing particles
Method: single particle / : Walshe JL, Cramer P

EMDB-54210:
Activated elongation complex with IWS1 and ELOF1 - MAP12 - Pol II local refinement of ELOF1,IWS1 and SPT6 containing particles
Method: single particle / : Walshe JL, Cramer P

EMDB-54251:
Activated Elongation Complex with IWS1 and ELOF1
Method: single particle / : Walshe JL, Cramer P

EMDB-53087:
Overall map of the transcribing Pol II-DSIF-SPT6-U1 snRNP complex
Method: single particle / : Zhang S

EMDB-53088:
Focused refined map of SPT6 in the EC-DSIF-SPT6-U1 snRNP complex
Method: single particle / : Zhang S

EMDB-53089:
Focused refined map of U1 snRNP in the EC-DSIF-SPT6-U1 snRNP complex
Method: single particle / : Zhang S

EMDB-15007:
Structure of SNAPc containing Pol II pre-initiation complex bound to U1 snRNA promoter (OC)
Method: single particle / : Rengachari S, Schilbach S, Kaliyappan T, Gouge J, Zumer K, Schwarz J, Urlaub H, Dienemann C, Vannini A, Cramer P

PDB-7zx8:
Structure of SNAPc containing Pol II pre-initiation complex bound to U1 snRNA promoter (OC)
Method: single particle / : Rengachari S, Schilbach S, Kaliyappan T, Gouge J, Zumer K, Schwarz J, Urlaub H, Dienemann C, Vannini A, Cramer P

EMDB-14996:
Structure of SNAPc:TBP-TFIIA-TFIIB sub-complex bound to U5 snRNA promoter
Method: single particle / : Rengachari S, Schilbach S, Kaliyappan T, Gouge J, Zumer K, Schwarz J, Urlaub H, Dienemann C, Vannini A, Cramer P

EMDB-14997:
Structure of SNAPc containing Pol II pre-initiation complex bound to U5 snRNA promoter (CC)
Method: single particle / : Rengachari S, Schilbach S, Kaliyappan T, Gouge J, Zumer K, Schwarz J, Urlaub H, Dienemann C, Vannini A, Cramer P

EMDB-15006:
Structure of SNAPc containing Pol II pre-initiation complex bound to U1 snRNA promoter (CC)
Method: single particle / : Rengachari S, Schilbach S, Kaliyappan T, Gouge J, Zumer K, Schwarz J, Urlaub H, Dienemann C, Vannini A, Cramer P

EMDB-15009:
Structure of SNAPc containing Pol II pre-initiation complex bound to U1 snRNA promoter (OC)
Method: single particle / : Rengachari S, Schilbach S, Kaliyappan T, Gouge J, Zumer K, Schwarz J, Urlaub H, Dienemann C, Vannini A, Cramer P

PDB-7zwc:
Structure of SNAPc:TBP-TFIIA-TFIIB sub-complex bound to U5 snRNA promoter
Method: single particle / : Rengachari S, Schilbach S, Kaliyappan T, Gouge J, Zumer K, Schwarz J, Urlaub H, Dienemann C, Vannini A, Cramer P

PDB-7zwd:
Structure of SNAPc containing Pol II pre-initiation complex bound to U5 snRNA promoter (CC)
Method: single particle / : Rengachari S, Schilbach S, Kaliyappan T, Gouge J, Zumer K, Schwarz J, Urlaub H, Dienemann C, Vannini A, Cramer P

PDB-7zx7:
Structure of SNAPc containing Pol II pre-initiation complex bound to U1 snRNA promoter (CC)
Method: single particle / : Rengachari S, Schilbach S, Kaliyappan T, Gouge J, Zumer K, Schwarz J, Urlaub H, Dienemann C, Vannini A, Cramer P

PDB-7zxe:
Structure of SNAPc containing Pol II pre-initiation complex bound to U1 snRNA promoter (OC)
Method: single particle / : Rengachari S, Schilbach S, Kaliyappan T, Gouge J, Zumer K, Schwarz J, Urlaub H, Dienemann C, Vannini A, Cramer P

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more