[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 5,104 items for (author: shan & m)

EMDB-56657:
CTX/MthK complex
Method: single particle / : Qoraj D, Sprink T, Lange A

PDB-28no:
CTX/MthK complex
Method: single particle / : Qoraj D, Sprink T, Lange A

EMDB-80301:
Cryo-EM structure of TasH-tigRNA-MM1 dsDNA complex
Method: single particle / : Zhang H, Liu Z

EMDB-80302:
Cryo-EM structure of TasH-tigRNA-MM5 dsDNA complex
Method: single particle / : Zhang H, Liu Z

PDB-25qk:
Cryo-EM structure of TasH-tigRNA-MM1 dsDNA complex
Method: single particle / : Zhang H, Liu Z

PDB-25ql:
Cryo-EM structure of TasH-tigRNA-MM5 dsDNA complex
Method: single particle / : Zhang H, Liu Z

EMDB-53206:
GABA-A receptor a3b3g2 + a3NB83(PAM) + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53207:
GABA-A receptor a3b3 (1:4) + a3NB77(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53208:
GABA-A receptor a2b3 (1:4) + a2NB29(near-silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53209:
GABA-A receptor a2b3 (1:4) + a2NB16(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53212:
GABA-A receptor a2b3 (1:4) + a2NB47(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53213:
GABA-A receptor a2b3g2 + a2NB00(PAM) + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53214:
GABA-A receptor a2b3g2 + a2NB04(silent) + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53215:
GABA-A receptor a2b3g2 + a2NB25(inhibitor)
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53216:
GABA-A receptor a2b3 (1:4) + a2NB06(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-56081:
GABA-A receptor a3b3g2 + a3NB77 + bicuculline
Method: single particle / : Shang C, Nestorow SA, Miller PS

EMDB-56094:
GABA-A receptor a3b3g2 + GABA-PRE + a3NB83
Method: single particle / : Shang C, Nestorow SA, Miller PS

EMDB-56109:
GABA-A receptor a3b3g2 + a3NB77 + GABA
Method: single particle / : Shang C, Nestorow SA, Miller PS

PDB-9qjp:
GABA-A receptor a3b3g2 + a3NB83(PAM) + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qjq:
GABA-A receptor a3b3 (1:4) + a3NB77(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qjr:
GABA-A receptor a2b3 (1:4) + a2NB29(near-silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qjs:
GABA-A receptor a2b3 (1:4) + a2NB16(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qjv:
GABA-A receptor a2b3 (1:4) + a2NB47(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qjx:
GABA-A receptor a2b3g2 + a2NB00(PAM) + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qjy:
GABA-A receptor a2b3g2 + a2NB04(silent) + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qk0:
GABA-A receptor a2b3g2 + a2NB25(inhibitor)
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qk1:
GABA-A receptor a2b3 (1:4) + a2NB06(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9tnb:
GABA-A receptor a3b3g2 + a3NB77 + bicuculline
Method: single particle / : Shang C, Nestorow SA, Miller PS

PDB-9tns:
GABA-A receptor a3b3g2 + GABA-PRE + a3NB83
Method: single particle / : Shang C, Nestorow SA, Miller PS

PDB-9tpq:
GABA-A receptor a3b3g2 + a3NB77 + GABA
Method: single particle / : Shang C, Nestorow SA, Miller PS

EMDB-71893:
cryoEM structure of drug bound human SLC33A1 transporter
Method: single particle / : Rafiq M, Lander GC

EMDB-73816:
cryoEM structure of human SLC33A1 transporter
Method: single particle / : Rafiq M, Lander GC

PDB-9pvm:
cryoEM structure of drug bound human SLC33A1 transporter
Method: single particle / : Rafiq M, Lander GC

PDB-9z5i:
cryoEM structure of human SLC33A1 transporter
Method: single particle / : Rafiq M, Lander GC

EMDB-63939:
G protein-coupled receptor complex
Method: single particle / : Wang XH, Li WM

PDB-9u7l:
G protein-coupled receptor complex
Method: single particle / : Wang XH, Li WM

EMDB-54637:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-54638:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-54639:
Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in open state (open COX1-mtRNC-OXA1L/MITRAC)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-54640:
Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in closed state (closed COX1-mtRNC-OXA1L/MITRAC)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-55836:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with peptidyl-tRNA (P)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-55837:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in classical pre-translocation state (AP)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-55838:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in late hybrid state (H2)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

PDB-9s7b:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

PDB-9s7c:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

PDB-9s7d:
Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in open state (open COX1-mtRNC-OXA1L/MITRAC)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

PDB-9s7e:
Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in closed state (closed COX1-mtRNC-OXA1L/MITRAC)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-55120:
Focus refined 60S map of WT-HEK 80S ribosome bound to Kozak mRNA (WT-Kozak)
Method: single particle / : Hiregange DG, Fraticelli D, Bashan A, Yonath A, Dikstein R

EMDB-55121:
Focus refined 40S map of WT-HEK 80S ribosome bound to Kozak mRNA (WT-Kozak)
Method: single particle / : Hiregange DG, Fraticelli D, Bashan A, Yonath A, Dikstein R

EMDB-55126:
WT-HEK 80S ribosome bound to Kozak mRNA (WT-Kozak) consensus map
Method: single particle / : Hiregange DG, Fraticelli D, Bashan A, Yonath A, Dikstein R

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more