[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 44,447 items for (author: ma & c)

EMDB-72725:
Cryo-EM structure of ternary complex BCL6-CRBN-DDB1 with BMS-986458 (local refined), a potent and selective BCL6 ligand directed degrader (LDD)
Method: single particle / : Zhu J, Fang W, Pagarigan B

PDB-9ya9:
Cryo-EM structure of ternary complex BCL6-CRBN-DDB1 with BMS-986458 (local refined), a potent and selective BCL6 ligand directed degrader (LDD)
Method: single particle / : Zhu J, Fang W, Pagarigan B

EMDB-64142:
Cryo-EM structure of the HBsAg dimer and Complex with Fab
Method: single particle / : Liu Y, Liao M, Liu Z, Ju B, Zhang Z

PDB-9ugo:
Cryo-EM structure of the HBsAg dimer and Complex with Fab
Method: single particle / : Liu Y, Liao M, Liu Z, Ju B, Zhang Z

EMDB-54897:
Structure of the honeybee GABAA RDL receptor with GABA and Abamectin
Method: single particle / : Laboure T, Nury H

PDB-9she:
Structure of the honeybee GABAA RDL receptor with GABA and Abamectin
Method: single particle / : Laboure T, Nury H

EMDB-72655:
Gb1g2 crosslinked to PLCb3
Method: single particle / : Fisher IJ, Lyon AM

EMDB-72732:
Gbg crosslinked to PLCb3 - second conformation
Method: single particle / : Fisher IJ, Lyon AM

EMDB-72733:
Gbg crosslinked to PLCb3 - second conformation
Method: single particle / : Fisher IJ, Lyon AM

PDB-9y7h:
Gb1g2 crosslinked to PLCb3
Method: single particle / : Fisher IJ, Lyon AM

PDB-9yao:
Gbg crosslinked to PLCb3 - second conformation
Method: single particle / : Fisher IJ, Lyon AM

PDB-9yap:
Gbg crosslinked to PLCb3 - second conformation
Method: single particle / : Fisher IJ, Lyon AM

EMDB-56238:
In situ cryo-ET subtomogram averaged map of Flotillin complex
Method: subtomogram averaging / : Li D, Lizarrondo J, Wilfling F

EMDB-56295:
In situ cryo-ET tomogram of a lysosomal structure in untreated HeLa TMEM192-3xHA cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56296:
In situ cryo-ET tomogram of lysosome damaged by LLOMe (0.5mM, 60min) in HeLa TMEM192-3xHA cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56297:
In situ cryo-ET of lysosome damaged by LLOMe (0.5mM, 60min) encapsulated in an autophagosome in HeLa TMEM192-3xHA cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56298:
In situ cryo-ET tomogram of lysosomes in BAPTA AM pre-treated (50uM, 30min) and LLOMe (0.5mM, 60min) treated TMEM192-3xHA HeLa cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56300:
In situ cryo-ET tomogram of lysosomes in LLOMe (0.5mM, 60min) treated TMEM192-3xHA HeLa cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56327:
In situ cryo-ET tomogram of lysosomal structure in untreated rat hippocampal neurons
Method: electron tomography / : Li D, Schwarz A, Wilfling F

EMDB-56329:
In situ cryo-ET tomogram of lysosomes in E64d pre-treated (20uM, 30min) and LLOMe (0.5mM, 60min) treated TMEM192-3xHA HeLa cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56330:
In situ cryo-ET tomogram of lysosomal structure in LLOMe-treated (0.5mM, 1h) rat hippocampal neuron.
Method: electron tomography / : Li D, Schwarz A, Wilfling F

EMDB-74981:
The ER membrane protein complex acts as a chaperone to promote voltage-gated calcium channel assembly
Method: single particle / : Singal B, Biswal M, Pleiner T

PDB-9zz6:
The ER membrane protein complex acts as a chaperone to promote voltage-gated calcium channel assembly
Method: single particle / : Singal B, Biswal M, Pleiner T

EMDB-55930:
TAF15 amyloid filament fold B variant 1
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-55931:
TAF15 amyloid filament fold B variant 2
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-55932:
TAF14 amyloid filament fold B variant 3
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56025:
TAF15 amyloid filament fold H (Y38C)
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56026:
TAF15 amyloid filament fold G
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56027:
TAF15 amyloid filament fold F
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56028:
TAF15 amyloid filament fold E variant 1
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56029:
TAF15 amyloid filament fold E variant 2
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56030:
TAF15 amyloid filament fold D
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56031:
TAF15 amyloid filament fold C variant 1
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56032:
TAF15 amyloid filament fold C variant 1 doublet
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56040:
TAF15 amyloid filament fold D prime
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56041:
TAF15 amyloid filament fold C variant 2
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9thm:
TAF15 amyloid filament fold B variant 1
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9thn:
TAF15 amyloid filament fold B variant 2
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9thp:
TAF14 amyloid filament fold B variant 3
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9tke:
TAF15 amyloid filament fold H (Y38C)
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9tkf:
TAF15 amyloid filament fold G
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9tkg:
TAF15 amyloid filament fold F
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9tkh:
TAF15 amyloid filament fold E variant 1
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9tki:
TAF15 amyloid filament fold E variant 2
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9tkj:
TAF15 amyloid filament fold D
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9tkk:
TAF15 amyloid filament fold C variant 1
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9tkl:
TAF15 amyloid filament fold C variant 1 doublet
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9tkz:
TAF15 amyloid filament fold D prime
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9tl2:
TAF15 amyloid filament fold C variant 2
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-63404:
PSI-LHCI supercomplex binding with 4 Lhcas from M. polymorpha
Method: single particle / : Tsai PC, La Rocca R, Shen JR, Akita F

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more