[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,587 items for (author: li & gb)

EMDB-63691:
At S3 trimer
Method: single particle / : Zhang SS

EMDB-63692:
At S1+2S3 trimer
Method: single particle / : Zhang SS

EMDB-63695:
At 2S1+S3-tRNA trimer
Method: single particle / : Zhang SS

PDB-9m7r:
At S3 trimer
Method: single particle / : Zhang SS

PDB-9m7s:
At S1+2S3 trimer
Method: single particle / : Zhang SS

PDB-9m7w:
At 2S1+S3-tRNA trimer
Method: single particle / : Zhang SS

EMDB-73615:
Sub-tomogram averaged structure of the non-piliated Tad machine in Caulobacter crescentus
Method: subtomogram averaging / : Iarocci J, Williston RF, Guo S

EMDB-73632:
Sub-tomogram averaged structure of the piliated Tad machine in Caulobacter crescentus
Method: subtomogram averaging / : Iarocci J, Williston RF, Guo S

EMDB-73646:
Sub-tomogram averaged structure of the Tad pilus secretin in Caulobacter crescentus
Method: subtomogram averaging / : Iarocci J, Williston RF, Guo S

EMDB-64335:
mouse PDCD5-TRiC complex
Method: single particle / : Song QQ, Cong Y

EMDB-64363:
mouse PDCD5-TRiC complex
Method: single particle / : Song QQ, Cong Y

EMDB-64365:
mouse PDCD5-TRiC complex
Method: single particle / : Song QQ, Cong Y

EMDB-64367:
mouse PDCD5-TRiC complex
Method: single particle / : Song QQ, Cong Y

PDB-9unw:
mouse PDCD5-TRiC complex
Method: single particle / : Song QQ, Cong Y

EMDB-75342:
A549 cell late endosome containing influenza A virus
Method: electron tomography / : Buth SA, Melikian GB

EMDB-75343:
A549 cell late endosome containing influenza A virus
Method: electron tomography / : Buth SA, Melikian GB

EMDB-75344:
A549 cell late endosome containing influenza A virus
Method: electron tomography / : Buth SA, Melikian GB

EMDB-75345:
A549 cell late endosome containing influenza A virus Pt52
Method: electron tomography / : Buth SA, Melikian GB

EMDB-75347:
A549 cell late endosome containing influenza A virus Pt47_1
Method: electron tomography / : Buth SA, Melikian GB

EMDB-75348:
A549 cell late endosome containing influenza A virus Pt44
Method: electron tomography / : Buth SA, Melikian GB

EMDB-75349:
A549 cell late endosome containing influenza A virus Pt38
Method: electron tomography / : Buth SA, Melikian GB

EMDB-63693:
At S1+tRNA trimer
Method: single particle / : Zhang SS

PDB-9m7u:
At S1+tRNA trimer
Method: single particle / : Zhang SS

EMDB-62620:
Cryo-EM structure of SARS-CoV-2 RBD in complex with ACE2 and mAb 1C4
Method: single particle / : Sun H, Jiang Y, Li S, Zheng Q, Xia N

EMDB-65522:
Cryo-EM structure of a 1C4 SpyTag-SpyCatcher mi3 nanoparticle
Method: single particle / : Sun H, Jiang Y, Li S, Zheng Q

EMDB-65523:
Cryo-EM structure of SARS-CoV-2 WT spike protein in complex with nAb 1C4
Method: single particle / : Sun H, Jiang Y, Li S, Zheng Q

PDB-9kwy:
Cryo-EM structure of SARS-CoV-2 RBD in complex with ACE2 and mAb 1C4
Method: single particle / : Sun H, Jiang Y, Li S, Zheng Q

PDB-9w14:
Cryo-EM structure of SARS-CoV-2 WT spike protein in complex with nAb 1C4
Method: single particle / : Sun H, Jiang Y, Li S, Zheng Q

EMDB-72942:
Flagella filament structure in H. pylori composed of flagellin FlaA
Method: single particle / : Kumar R, Yu H, Tachiyama S, Liu J

EMDB-72948:
Structure of flagellin FlaB filament in H. pylori
Method: single particle / : Kumar R, Yu H, Tachiyama S, Liu J

PDB-9ygu:
Flagella filament structure in H. pylori composed of flagellin FlaA
Method: single particle / : Kumar R, Yu H, Tachiyama S, Liu J

PDB-9yh1:
Structure of flagellin FlaB filament in H. pylori
Method: single particle / : Kumar R, Yu H, Tachiyama S, Liu J

EMDB-66412:
mouse PDCD5-TRiC-ADP complex
Method: single particle / : Song QQ, Cong Y

EMDB-70785:
Bacteriophage Ur-lambda TypeIIa infection complex
Method: subtomogram averaging / : Yu H, Liu J, Molineux IJ

EMDB-70786:
Bacteriophage Ur-lambda TypeIIb infection complex
Method: subtomogram averaging / : Yu H, Liu J, Molineux IJ

EMDB-74763:
HIV-1 CH505.N197D Env Ectodomain (Mature VLPs)
Method: subtomogram averaging / : Croft JT, Lee KK

EMDB-74779:
HIV-1 CH505.N197D Env Ectodomain (Immature VLPs)
Method: subtomogram averaging / : Croft JT, Lee KK

EMDB-74786:
HIV-1 Env BG505.SOSIP
Method: subtomogram averaging / : Croft JT, Lee KK

EMDB-74789:
HIV-1 ADA.CM Env
Method: subtomogram averaging / : Croft JT, Lee KK

EMDB-74792:
HIV-1 BG505.755* Env
Method: subtomogram averaging / : Croft JT, Lee KK

EMDB-74797:
HIV-1 ADA.CM.755* (Immature VLPs, Triton X-100 extracted)
Method: subtomogram averaging / : Croft JT, Lee KK

EMDB-74813:
HIV-1 ADA.CM.755* Env (Immature VLPs)
Method: subtomogram averaging / : Croft JT, Lee KK

EMDB-74814:
HIV-1 ADA.CM.755* Env (Immature VLPs, tilted class)
Method: subtomogram averaging / : Croft JT, Lee KK

EMDB-47765:
Week 26 C3V5, gp41-GH and gp41-base epitope polyclonal antibodies from participant 202 in complex with ConM SOSIP
Method: single particle / : Lin RN, Torres JL, Tran AS, Ozorowski G, Ward AB

EMDB-65405:
The cryo-EM structure of gRNA-bound SPARDA complex
Method: single particle / : Li Y, Jiang Y, Zheng Q, Li S

EMDB-65406:
Helical structure of gRNA-tDNA SPARDA complex
Method: helical / : Li Y, Zheng Q, Li S, Jiang Y

PDB-9vx1:
The cryo-EM structure of gRNA-bound SPARDA complex
Method: single particle / : Li Y, Jiang Y, Zheng Q, Li S

PDB-9vx6:
Helical structure of gRNA-tDNA SPARDA complex
Method: helical / : Li Y, Zheng Q, Li S, Jiang Y

EMDB-55905:
Cryo-EM structure of Z-DNA binding antibody Z-D11 in complex with left-handed Z-DNA
Method: single particle / : Chin DHR, Luo YB, Luo D

EMDB-55906:
Cryo-EM structure of Z22 mAb in complex with left-handed Z-DNA (dimer of trimer)
Method: single particle / : Chin DHR, Luo YB, Luo D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more