[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 362 items for (author: lewis & k)

EMDB-56114:
Structure of recombinantly assembled E83Q alpha-synuclein fibrils
Method: helical / : Shafiei N, Mohammed I, Kumar S, Mahul AL, Ekundayo B, Stahli D, Lewis AJ, Stahlberg H

PDB-9tpt:
Structure of recombinantly assembled E83Q alpha-synuclein fibrils
Method: helical / : Shafiei N, Mohammed I, Kumar ST, Mahul Mellier AL, Ekundayo B, Stahli D, Lewis AJ, Stahlberg H

EMDB-49494:
Thermothelomyces thermophilus SAM complex closed conformation
Method: single particle / : Diederichs K, Botos I, Buchanan SK

EMDB-49495:
Thermothelomyces thermophilus SAM complex open conformation
Method: single particle / : Diederichs K, Botos I, Buchanan SK

EMDB-49496:
Thermothelomyces thermophilus SAM complex bound to darobactin A
Method: single particle / : Diederichs K, Botos I, Buchanan SK

PDB-9nk6:
Thermothelomyces thermophilus SAM complex closed conformation
Method: single particle / : Diederichs K, Botos I, Buchanan SK

PDB-9nk7:
Thermothelomyces thermophilus SAM complex open conformation
Method: single particle / : Diederichs K, Botos I, Buchanan SK

PDB-9nk8:
Thermothelomyces thermophilus SAM complex bound to darobactin A
Method: single particle / : Diederichs K, Botos I, Buchanan SK

EMDB-70613:
Cryo-EM structure of rhesus antibody V033-Int1 in complex with HIV Env trimer Q23.17 MD39
Method: single particle / : Roark RS, Shapiro L, Kwong PD

PDB-9omg:
Cryo-EM structure of rhesus antibody V033-a.I1 in complex with HIV Env trimer Q23.17 MD39
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-46680:
Rhodospirillum rubrum Nitrogenase-like Methylthio-alkane Reductase Complex with an Oxidized P-cluster
Method: single particle / : Kreitler DF, Hu G, North JA

EMDB-52749:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 1)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

EMDB-52750:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 2)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

EMDB-52751:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 3)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

EMDB-52752:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 4)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

EMDB-52753:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 5)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

EMDB-52754:
Cryo-EM structure of Shigella flexneri LptDE in complex with a Bicyclic Peptide binder (Compound 12)
Method: single particle / : Allyjaun S, Dunbar E, Hardwick SW, Chirgadze DY, Hubbard J, van den Berg B, Newman H

EMDB-52755:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 13)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

EMDB-52896:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 16)
Method: single particle / : Allyjaun S, Newman H, Chirgadze DY, Hardwick SW, Hubbard J, van den Berg B, Dunbar E

PDB-9i92:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 1)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

PDB-9i93:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 2)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

PDB-9i94:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 3)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

PDB-9i95:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 4)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

PDB-9i96:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 5)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

PDB-9i97:
Cryo-EM structure of Shigella flexneri LptDE in complex with a Bicyclic Peptide binder (Compound 12)
Method: single particle / : Allyjaun S, Dunbar E, Hardwick SW, Chirgadze DY, Hubbard J, van den Berg B, Newman H

PDB-9i98:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 13)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

PDB-9q8n:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 16)
Method: single particle / : Allyjaun S, Newman H, Chirgadze DY, Hardwick SW, Hubbard J, van den Berg B, Dunbar E

EMDB-48344:
D24.1M01 Fab bound to HPV16 L1 pentamer
Method: single particle / : Hurlburt NK, Singh S, Rodarte JV, Pancera M

EMDB-48345:
A7M08 Fab bound to HPV16 L1 pentamer
Method: single particle / : Hurlburt NK, Singh S, Rodarte JV, Pancera M

EMDB-48346:
B25M05 Fab bound to HPV16 L1 pentamer
Method: single particle / : Hurlburt NK, Singh S, Rodarte JV, Pancera M

PDB-9ml1:
D24.1M01 Fab bound to HPV16 L1 pentamer
Method: single particle / : Hurlburt NK, Singh S, Rodarte JV, Pancera M

PDB-9ml2:
A7M08 Fab bound to HPV16 L1 pentamer
Method: single particle / : Hurlburt NK, Singh S, Rodarte JV, Pancera M

PDB-9ml3:
B25M05 Fab bound to HPV16 L1 pentamer
Method: single particle / : Hurlburt NK, Singh S, Rodarte JV, Pancera M

EMDB-49269:
The rigid portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex with amenamevir
Method: single particle / : Yao Q, Yu X

EMDB-49276:
The rigid portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex prepared with forked DNA and ATP-gamma-S
Method: single particle / : Yao Q, Yu X

EMDB-49277:
The flexible portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex prepared with forked DNA and ATP-gamma-S
Method: single particle / : Yao Q, Yu X

EMDB-49290:
The rigid portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex prepared with forked DNA, ATP-gamma-S and Pritelivir
Method: single particle / : Yao Q, Yu X, Baker D, Jensen G

EMDB-49291:
The flexible portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex prepared with forked DNA, ATP-gamma-S and Pritelivir
Method: single particle / : Yao Q, Yu X, Baker D, Jensen G

EMDB-49304:
The rigid portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex with Pritelivir
Method: single particle / : Yao Q, Yu X

EMDB-49306:
The flexible portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex with Pritelivir
Method: single particle / : Yao Q, Yu X, Baker D, Jensen G

EMDB-49326:
The flexible portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex with amenamevir
Method: single particle / : Yao Q, Yu X, Baker D, Jensen G

PDB-9nda:
The rigid portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex with amenamevir
Method: single particle / : Yao Q, Yu X

PDB-9ndq:
The rigid portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex prepared with forked DNA and ATP-gamma-S
Method: single particle / : Yao Q, Yu X

PDB-9ndt:
The flexible portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex prepared with forked DNA and ATP-gamma-S
Method: single particle / : Yao Q, Yu X

PDB-9ndz:
The rigid portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex prepared with forked DNA, ATP-gamma-S and Pritelivir
Method: single particle / : Yao Q, Yu X

PDB-9ne0:
The flexible portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex prepared with forked DNA, ATP-gamma-S and Pritelivir
Method: single particle / : Yao Q, Yu X

PDB-9neb:
The rigid portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex with Pritelivir
Method: single particle / : Yao Q, Yu X

PDB-9nee:
The flexible portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex with Pritelivir
Method: single particle / : Yao Q, Yu X

PDB-9nel:
The flexible portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex with amenamevir
Method: single particle / : Yao Q, Yu X

EMDB-70838:
Rabbit 37496 base and V1/V3 epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more