[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 51 items for (author: geohring & ic)

EMDB-48239:
Motor domain with Apo AAA1 and ADP AAA3 from yeast full-length dynein-1 in 0.1 mM ATP condition
Method: single particle / : Geohring IC, Chai P, Iyer BR

EMDB-48240:
Motor domain with ADP AAA1 and ADP AAA3 from yeast full-length dynein-1 in 0.1 mM ATP condition
Method: single particle / : Geohring IC, Chai P, Iyer BR

EMDB-48241:
Motor domain alone with Apo AAA1 and ADP AAA3 from yeast full-length dynein-1 and Pac1 in 0.1 mM ATP condition
Method: single particle / : Geohring IC, Chai P, Iyer BR

EMDB-48242:
Motor domain-Pac1 complex with ADP AAA1 and Apo AAA3 from yeast full-length dynein-1 and Pac1 in 0.1 mM ATP condition
Method: single particle / : Geohring IC, Chai P, Iyer BR

EMDB-44681:
Composite structure of full-length human dynein-1 in phi-particle conformation
Method: single particle / : Chai P, Zhang K

EMDB-44682:
State-1(phi motor) of full-length human dynein-1 in 5mM ATP
Method: single particle / : Chai P, Zhang K

EMDB-44683:
State-2 of motor domain from full-length human dynein-1 in 5mM ATP
Method: single particle / : Chai P, Zhang K

EMDB-44684:
State-3 of motor domain from full-length human dynein-1 in 5mM ATP
Method: single particle / : Chai P, Zhang K

EMDB-44685:
State-4 of motor domain from full-length human dynein-1 in 5 mM ATP
Method: single particle / : Chai P, Zhang K

EMDB-44686:
State-5a of motor domain from full-length human dynein-1 in 5 mM ATP
Method: single particle / : Chai P, Zhang K

EMDB-44687:
State-5b of motor domain from full-length human dynein-1 in 5 mM ATP
Method: single particle / : Chai P, Zhang K

EMDB-44688:
State-6 of motor domain from full-length human dynein-1 in 5 mM ATP
Method: single particle / : Chai P, Zhang K

EMDB-44689:
State-7a of motor domain from full-length human dynein-1 in 5 mM ATP
Method: single particle / : Chai P, Zhang K

EMDB-44690:
State-7b of motor domain from full-length human dynein-1 in 5 mM ATP
Method: single particle / : Chai P, Zhang K

EMDB-44691:
State-7c of motor domain from full-length human dynein-1 in 5 mM ATP
Method: single particle / : Chai P, Zhang K

EMDB-44693:
Motor domain from full-length human dynein-1 bound to microtubules in apo condition
Method: single particle / : Chai P, Zhang K

EMDB-44694:
Post-1 motor domain from full-length human dynein-1 bound to microtubules in 5mM ADP condition
Method: single particle / : Chai P, Zhang K

EMDB-44695:
Post-2 motor domain from full-length human dynein-1 bound to microtubules in 5mM ADP condition
Method: single particle / : Chai P, Zhang K

EMDB-44696:
Motor domain from full-length human dynein-1 bound to microtubules in 5mM AMPPNP condition
Method: single particle / : Chai P, Zhang K

EMDB-44697:
State-1(phi motor) of full-length human dynein-1 in 5mM ATPVi
Method: single particle / : Chai P, Zhang K

EMDB-44698:
State-2 of full-length human dynein-1 in 5mM ATPVi
Method: single particle / : Chai P, Zhang K

EMDB-44699:
State-4 of motor domain from full-length human dynein-1 in 5mM ATPVi
Method: single particle / : Chai P, Zhang K

EMDB-44701:
State-1 of the motor domain from full-length human dynein-1 in 5mM AMPPNP
Method: single particle / : Chai P, Zhang K

EMDB-44702:
State-2 of the motor domain from full-length human dynein-1 in 5mM AMPPNP
Method: single particle / : Chai P, Zhang K

EMDB-44703:
State-4 of the motor domain from full-length human dynein-1 in 5mM AMPPNP
Method: single particle / : Chai P, Zhang K

EMDB-44704:
State-5 of motor domain from full-length human dynein-1 in 5mM AMPPNP
Method: single particle / : Chai P, Zhang K

EMDB-44705:
State-6 of motor domain from full-length human dynein-1 in 5mM AMPPNP
Method: single particle / : Chai P, Zhang K

EMDB-44706:
State-7 of the motor domain from full-length human dynein-1 in 5mM AMPPNP
Method: single particle / : Chai P, Zhang K

EMDB-44708:
State-1 of motor domain from full-length human phi dynein-1 in 5 mM ADP
Method: single particle / : Chai P, Zhang K

EMDB-44709:
State-2 of motor domain from full-length human dynein-1 in 5 mM ADP
Method: single particle / : Chai P, Zhang K

EMDB-44710:
State-5 of motor domain from full-length human dynein-1 in 5 mM ADP
Method: single particle / : Chai P, Zhang K

EMDB-44711:
State-6 of motor domain from full-length human dynein-1 in 5 mM ADP
Method: single particle / : Chai P, Zhang K

EMDB-44712:
State-7a-post1 of motor domain from full-length human dynein-1 in 5 mM ADP
Method: single particle / : Chai P, Zhang K

EMDB-44713:
State-7b-post2 of motor domain from full-length human dynein-1 in 5 mM ADP
Method: single particle / : Chai P, Zhang K

EMDB-44715:
State-1 of motor domain from full-length human dynein-1 in apo condition
Method: single particle / : Chai P, Zhang K

EMDB-44716:
State-2 of motor domain from full-length human dynein-1 in apo condition
Method: single particle / : Chai P, Zhang K

EMDB-44717:
State-7 of motor domain from full-length human dynein-1 in apo condition
Method: single particle / : Chai P, Zhang K

EMDB-44718:
State-8 of motor domain from full-length human dynein-1 in apo condition
Method: single particle / : Chai P, Zhang K

EMDB-44720:
The alpha registry-locked dynein motor domain mutant in 5mM ATP condition, class1
Method: single particle / : Chai P, Zhang K

EMDB-44721:
The alpha registry-locked dynein motor domain mutant in 5mM ATP condition, class2
Method: single particle / : Chai P, Zhang K

EMDB-44722:
The alpha registry-locked dynein motor domain mutant in 5mM ATPVi condition, class1
Method: single particle / : Chai P, Zhang K

EMDB-44723:
The alpha registry-locked dynein motor domain mutant in 5mM ATPVi condition, class2
Method: single particle / : Chai P, Zhang K

EMDB-46647:
Raw consensus map of phi-particle dynein-1
Method: single particle / : Chai P, Zhang K

EMDB-46648:
Focused refinement map of tail region in phi-particle dynein-1
Method: single particle / : Chai P, Zhang K

EMDB-46650:
Focused refinement map of motor domain region in phi-particle dynein-1
Method: single particle / : Chai P, Zhang K

EMDB-46856:
State-1 of the motor domain from full-length human dynein-1 in 5mM AMPPNP with 5mM Mg2+
Method: single particle / : Chai P, Zhang K

EMDB-46857:
State-2 of the motor domain from full-length human dynein-1 in 5mM AMPPNP with 5mM Mg2+
Method: single particle / : Chai P, Zhang K

EMDB-46858:
State-4 of the motor domain from full-length human dynein-1 in 5mM AMPPNP with 5mM Mg2+
Method: single particle / : Chai P, Zhang K

EMDB-46859:
State-5 of the motor domain from full-length human dynein-1 in 5mM AMPPNP with 5mM Mg2+
Method: single particle / : Chai P, Zhang K

EMDB-46860:
State-7-Post-2 of the motor domain from full-length human dynein-1 in 5mM AMPPNP with 5mM Mg2+
Method: single particle / : Chai P, Zhang K

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more