[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 515 items for (author: chen & dy)

EMDB-74763:
HIV-1 CH505.N197D Env Ectodomain (Mature VLPs)
Method: subtomogram averaging / : Croft JT, Lee KK

EMDB-74779:
HIV-1 CH505.N197D Env Ectodomain (Immature VLPs)
Method: subtomogram averaging / : Croft JT, Lee KK

EMDB-74786:
HIV-1 Env BG505.SOSIP
Method: subtomogram averaging / : Croft JT, Lee KK

EMDB-74789:
HIV-1 ADA.CM Env
Method: subtomogram averaging / : Croft JT, Lee KK

EMDB-74792:
HIV-1 BG505.755* Env
Method: subtomogram averaging / : Croft JT, Lee KK

EMDB-74797:
HIV-1 ADA.CM.755* (Immature VLPs, Triton X-100 extracted)
Method: subtomogram averaging / : Croft JT, Lee KK

EMDB-74813:
HIV-1 ADA.CM.755* Env (Immature VLPs)
Method: subtomogram averaging / : Croft JT, Lee KK

EMDB-74814:
HIV-1 ADA.CM.755* Env (Immature VLPs, tilted class)
Method: subtomogram averaging / : Croft JT, Lee KK

EMDB-62427:
Cryo-EM structure of the heterotrimeric interleukin-2 receptor in complex with interleukin-2 and anti-CD25 Fab S417
Method: single particle / : Katsura K, Matsumoto T, Shirouzu M

PDB-9kmc:
Cryo-EM structure of the heterotrimeric interleukin-2 receptor in complex with interleukin-2 and anti-CD25 Fab S417
Method: single particle / : Katsura K, Matsumoto T, Shirouzu M

EMDB-49708:
cryo-EM structure of broad betacoronavirus binding antibody 1871 in complex with OC43 S2 subunit
Method: single particle / : Muthuraman K, Jackman MJ, Julien JP

PDB-9nqz:
cryo-EM structure of broad betacoronavirus binding antibody 1871 in complex with OC43 S2 subunit
Method: single particle / : Muthuraman K, Jackman MJ, Julien JP

EMDB-70077:
Plasmodium falciparum 20S proteasome bound to inhibitor 159
Method: single particle / : Han Y, Deng X, Ray S, Phillips M

EMDB-70078:
Plasmodium falciparum 20S proteasome bound to inhibitor 296
Method: single particle / : Han Y, Deng X, Ray S, Phillips M

PDB-9o3e:
Plasmodium falciparum 20S proteasome bound to inhibitor 159
Method: single particle / : Han Y, Deng X, Ray S, Phillips M

PDB-9o3f:
Plasmodium falciparum 20S proteasome bound to inhibitor 296
Method: single particle / : Han Y, Deng X, Ray S, Phillips M

EMDB-54691:
Ternary PROTAC-mediated complex consisting of Cereblon, DDB1 and BRD4-BD1, non-covalently linked by JQ1-AcN
Method: single particle / : Fischer G, Peter D, Arce-Solano S, Kessler D

PDB-9sai:
Ternary PROTAC-mediated complex consisting of Cereblon, DDB1 and BRD4-BD1, non-covalently linked by JQ1-AcN
Method: single particle / : Fischer G, Peter D, Arce-Solano S, Kessler D

EMDB-48424:
CGRP Receptor in complex with dC2_050
Method: single particle / : Cao J, Cary BP, Belousoff MJ, Wootten DL

PDB-9mni:
CGRP Receptor in complex with dC2_050
Method: single particle / : Cao J, Cary BP, Belousoff MJ, Wootten DL

EMDB-54690:
Ternary PROTAC-mediated complex of BRD4-BD1/CRBN/DDB1 and JQ1-AcQ bifunctional degrader
Method: single particle / : Peter D, Fischer G, Arce Solano S, Kessler D

EMDB-54895:
Focus map of ternary PROTAC-mediated complex of BRD4-BD1/CRBN/DDB1 and JQ1-AcQ bifunctional degrader
Method: single particle / : Peter D, Fischer G, Arce Solano S, Kessler D

EMDB-54896:
Consensus map of ternary PROTAC-mediated complex of BRD4-BD1/CRBN/DDB1 and JQ1-AcQ bifunctional degrader
Method: single particle / : Peter D, Fischer G, Arce Solano S, Kessler D

PDB-9saf:
Ternary PROTAC-mediated complex of BRD4-BD1/CRBN/DDB1 and JQ1-AcQ bifunctional degrader
Method: single particle / : Peter D, Fischer G, Arce Solano S, Kessler D

EMDB-63844:
Cryo-EM structure of the human CRP-CPS23F complex
Method: single particle / : Chen DY, Xie YF, Gao F, Qi JX, Zhang JR

EMDB-72382:
Human antibody Fab MPV499 bound to hMPV DsCav-ES2
Method: single particle / : Esfahani BG, Mousa J, Khalil AM

EMDB-70793:
Human antibody Fab MPV498 bound to hMPV B2 post-fusion F
Method: single particle / : Ghazi Esfahani B, Mousa J, Khalil AM

EMDB-71547:
Human antibody Fab MPV513 bound to hMPV DsCav-ES2
Method: single particle / : Ghazi Esfahani B, Mousa J, Khalil AM

EMDB-71548:
Human antibody Fab MPV510 bound to hMPV DsCav-ES2-IPDS F protein
Method: single particle / : Ghazi Esfahani N, Mousa J, Khalil AM

PDB-9os5:
Human antibody Fab MPV498 bound to hMPV B2 post-fusion F
Method: single particle / : Ghazi Esfahani B, Mousa J, Khalil AM

PDB-9pdx:
Human antibody Fab MPV513 bound to hMPV DsCav-ES2
Method: single particle / : Ghazi Esfahani B, Mousa J, Khalil AM

PDB-9pdy:
Human antibody Fab MPV510 bound to hMPV DsCav-ES2-IPDS F protein
Method: single particle / : Ghazi Esfahani N, Mousa J, Khalil AM

EMDB-61289:
Herpes simplex virus type 1 polymerase machinery in complex with duplex DNA, acyclovir triphosphate and calcium ions
Method: single particle / : Wu YQ, Chen XL, Jiang ZY, Li DY, Zhang ZY, Dong CJ

EMDB-45301:
mouse Seipin/Adig complex
Method: single particle / : Li C, Han Y, Wynn RM, Chen Z, Scherer PE

EMDB-45302:
mouse Seipin complex
Method: single particle / : Li C, Han Y, Wynn RM, Chen Z, Scherer PE

EMDB-70961:
Cryo-EM structure of S. Mansoni p97 bound to CB-5083
Method: single particle / : Stephens DR, Han Y, Chen Z, Collins JJ, Fung HYJ

EMDB-71062:
Cryo-EM structure of apo S. Mansoni p97
Method: single particle / : Stephens DR, Han Y, Chen Z, Collins JJ, Fung HYJ

EMDB-71063:
Cryo-EM structure of S. Mansoni p97 bound to ATPgS
Method: single particle / : Stephens DR, Han Y, Chen Z, Collins JJ, Fung HYJ

EMDB-71064:
Cryo-EM structure of S. Mansoni p97 bound to compound 739
Method: single particle / : Stephens DR, Han Y, Chen Z, Liang J, Ready J, Collins JJ, Fung HYJ

EMDB-71066:
Cryo-EM structure of S. Mansoni p97 bound to compound 804
Method: single particle / : Stephens DR, Han Y, Chen Z, Liang J, Ready J, Collins JJ, Fung HYJ

PDB-9ox9:
Cryo-EM structure of S. Mansoni p97 bound to CB-5083
Method: single particle / : Stephens DR, Han Y, Chen Z, Collins JJ, Fung HYJ

PDB-9p00:
Cryo-EM structure of apo S. Mansoni p97
Method: single particle / : Stephens DR, Han Y, Chen Z, Collins JJ, Fung HYJ

PDB-9p01:
Cryo-EM structure of S. Mansoni p97 bound to ATPgS
Method: single particle / : Stephens DR, Han Y, Chen Z, Collins JJ, Fung HYJ

PDB-9p02:
Cryo-EM structure of S. Mansoni p97 bound to compound 739
Method: single particle / : Stephens DR, Han Y, Chen Z, Liang J, Ready J, Collins JJ, Fung HYJ

PDB-9p07:
Cryo-EM structure of S. Mansoni p97 bound to compound 804
Method: single particle / : Stephens DR, Han Y, Chen Z, Liang J, Ready J, Collins JJ, Fung HYJ

EMDB-70838:
Rabbit 37496 base and V1/V3 epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70839:
Rabbit 37496 base and gp41-GH epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70840:
Rabbit 37496 base and gp120-GH epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70846:
Rabbit 37496 base and C3V5 epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70847:
Rabbit 37450 base, gp41-FP and gp120int epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more