[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 38 items for (author: carbone & ce)

EMDB-72825:
Human delta opioid receptor complex with mini-Gi and agonist DADLE
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-72826:
Human delta opioid receptor complex with mini-Gi and agonist DADLE and allosteric modulator MIPS3614
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-72827:
Human delta opioid receptor complex with mini-Gi and agonist DADLE and allosteric modulator MIPS3983
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-72828:
receptor focused refinement of human delta opioid receptor complex with mini-Gi and DADLE
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-72829:
receptor focused refinement of the human delta opioid complex with mini-Gi, agonist DADLE and allosteric modulator MIPS3614
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-72830:
receptor focused refinement of human delta opioid receptor complex with mini-Gi, agonist DADLE and allosteric modulator MIPS3983
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-72831:
conensus map of the human delta opioid complex with mini-Gi, agonist DADLE and allosteric modulator BMS-986187
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-72832:
receptor focused refinement of human delta opioid complex with mini-Gi, agonist DADLE and allosteric modulator BMS-986187
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

PDB-9ydp:
Human delta opioid receptor complex with mini-Gi and agonist DADLE
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

PDB-9ydq:
Human delta opioid receptor complex with mini-Gi and agonist DADLE and allosteric modulator MIPS3614
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

PDB-9ydr:
Human delta opioid receptor complex with mini-Gi and agonist DADLE and allosteric modulator MIPS3983
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-25405:
Late translocation intermediate with EF-G partially dissociated (Structure V)
Method: single particle / : Carbone CE, Loveland AB

EMDB-25407:
Mid translocation intermediate with EF-G bound with GDP (Structure IV)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-25409:
Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-25410:
Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-25411:
Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-25415:
Late translocation intermediate with EF-G dissociated (Structure VI)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-25418:
Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-25420:
Pre translocation, non-rotated 70S ribosome (Structure I)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-25421:
Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-22669:
Cryo-EM map of pre-translocation non-frameshifting(CCA-A) complex (Structure I)
Method: single particle / : Demo G, Loveland AB

EMDB-22670:
Cryo-EM map of mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)
Method: single particle / : Demo G, Loveland AB

EMDB-22671:
Cryo-EM map of near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)
Method: single particle / : Demo G, Loveland AB

EMDB-22672:
Cryo-EM map of pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)
Method: single particle / : Demo G, Loveland AB

EMDB-22673:
Cryo-EM of mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)
Method: single particle / : Demo G, Loveland AB

EMDB-22674:
Cryo-EM map of near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)
Method: single particle / : Demo G, Loveland AB

EMDB-23528:
Cryo-EM of pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)
Method: single particle / : Demo G, Loveland AB

EMDB-22459:
ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-22461:
ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-22464:
ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-IV)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-22465:
70S ribosome stalled on truncated mRNA
Method: single particle / : Carbone CE, Korostelev AA

EMDB-22466:
70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-22467:
70S rotated ribosome stalled on truncated mRNA
Method: single particle / : Carbone CE, Korostelev AA

EMDB-22468:
70S ribosome stalled on long mRNA with ArfB C-terminus bound in the mRNA tunnel
Method: single particle / : Carbone CE, Korostelev AA

EMDB-22469:
70S ribosome stalled on long mRNA with ArfB bound in the A site
Method: single particle / : Carbone CE, Korostelev AA

EMDB-22470:
70S ribosome stalled on long mRNA with ArfB bound in the A site (+9-VI)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-22471:
Rotated 70S ribosome stalled on long mRNA with ArfB-1 bound in the A site (+9-V)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-22472:
Rotated 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound in the A site (+9-IV)
Method: single particle / : Carbone CE, Korostelev AA

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more