[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,274 items for (author: kon & t)

EMDB-50356:
Empty capsid of Rhodobacter microvirus Ebor computed with I4 symmetry
Method: single particle / : Bardy P, MacDonald CIW, Jenkins HT, Byrom L, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Fogg PCM, Antson AA

EMDB-50357:
Native capsid of Rhodobacter microvirus Ebor computed with I4 symmetry
Method: single particle / : Bardy P, MacDonald CIW, Jenkins HT, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Fogg PCM, Antson AA

EMDB-50359:
Rhodobacter microvirus Ebor attached to B10 host cell reconstructed by single particle analysis with applied C5 symmetry
Method: single particle / : Bardy P, MacDonald CIW, Jenkins HT, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Fogg PCM, Antson AA

EMDB-50360:
Rhodobacter microvirus Ebor attached to the outer membrane vesicle
Method: subtomogram averaging / : Bardy P, Blaza JN, Jenkins HT, Nicholas TR, Konig HC, Alim NTB, Hart SJ, Turkenburg JP, Fogg PCM, Beatty JT, Antson AA

EMDB-50361:
Rhodobacter microvirus Ebor attached to the host cell reconstructed by subtomogram averaging
Method: subtomogram averaging / : Bardy P, Traore DAK, Blaza JN, Jenkins HT, Nicholas TR, Hart SJ, Turkenburg JP, Fogg PCM, Antson AA

EMDB-41409:
Cryo-EM structure of PCSK9 mimic HIT01-K21Q-R218E with AMG145 Fab
Method: single particle / : Cheng J, Kwong PD

EMDB-34718:
Cryo-EM structure of human norepinephrine transporter NET in an inward-open state at resolution of 2.5 angstrom
Method: single particle / : Tan J, Xiao Y, Kong F, Lei J, Yuan Y, Yan C

EMDB-34719:
Cryo-EM structure of human norepinephrine transporter NET in the presence of norepinephrine in an inward-open state at resolution of 2.9 angstrom.
Method: single particle / : Tan J, Xiao Y, Kong F, Lei J, Yuan Y, Yan C

EMDB-34720:
Cryo-EM structure of human norepinephrine transporter NET in the presence of dopamine in an inward-open state at resolution of 3.0 angstrom.
Method: single particle / : Tan J, Xiao Y, Kong F, Lei J, Yuan Y, Yan C

EMDB-34721:
Cryo-EM structure of human norepinephrine transporter NET in the presence of the antidepressant desipramine in an inward-open state at resolution of 2.5 angstrom.
Method: single particle / : Tan J, Xiao Y, Kong F, Lei J, Yuan Y, Yan C

EMDB-34722:
Cryo-EM structure of human norepinephrine transporter NET in the presence of the antidepressant bupropion in an inward-open state at resolution of 3.0 angstrom.
Method: single particle / : Tan J, Xiao Y, Kong F, Lei J, Yuan Y, Yan C

PDB-8hfe:
Cryo-EM structure of human norepinephrine transporter NET in an inward-open state at resolution of 2.5 angstrom
Method: single particle / : Tan J, Xiao Y, Kong F, Lei J, Yuan Y, Yan C

PDB-8hff:
Cryo-EM structure of human norepinephrine transporter NET in the presence of norepinephrine in an inward-open state at resolution of 2.9 angstrom.
Method: single particle / : Tan J, Xiao Y, Kong F, Lei J, Yuan Y, Yan C

PDB-8hfg:
Cryo-EM structure of human norepinephrine transporter NET in the presence of dopamine in an inward-open state at resolution of 3.0 angstrom.
Method: single particle / : Tan J, Xiao Y, Kong F, Lei J, Yuan Y, Yan C

PDB-8hfi:
Cryo-EM structure of human norepinephrine transporter NET in the presence of the antidepressant desipramine in an inward-open state at resolution of 2.5 angstrom.
Method: single particle / : Tan J, Xiao Y, Kong F, Lei J, Yuan Y, Yan C

PDB-8hfl:
Cryo-EM structure of human norepinephrine transporter NET in the presence of the antidepressant bupropion in an inward-open state at resolution of 3.0 angstrom.
Method: single particle / : Tan J, Xiao Y, Kong F, Lei J, Yuan Y, Yan C

EMDB-42528:
CryoEM structure of A/Perth/16/2009 H3 in complex with flu HA central stem VH1-18 antibody UCA6
Method: single particle / : Huang J, Han J, Ward AB

EMDB-42529:
CryoEM structure of A/Michigan/45/2015 H1 in complex with flu HA central stem VH1-18 antibody 09-1B12
Method: single particle / : Huang J, Han J, Ward AB

EMDB-42530:
CryoEM structure of A/Michigan/45/2015 H1 in complex with flu HA central stem VH1-18 antibody UCA6_N55T
Method: single particle / : Huang J, Han J, Ward AB

EMDB-42531:
CryoEM structure of A/Perth/16/2009 H3 in complex with polyclonal Fab from mice immunized with H3 stem nanoparticles-15 days post immunization
Method: single particle / : Huang J, Han J, Ward AB

EMDB-42532:
CryoEM structure of A/Perth/16/2009 H3 in complex with polyclonal Fab from mice immunized with H3 stem nanoparticles-28 days post immunization
Method: single particle / : Huang J, Han J, Ward AB

EMDB-42533:
CryoEM structure of A/Shanghai/1/2013 H7 in complex with polyclonal Fab from mice immunized with H7 stem nanoparticles-15 days post-immunization
Method: single particle / : Huang J, Han J, Ward AB

EMDB-42534:
CryoEM structure of A/Shanghai/1/2013 H7 in complex with polyclonal Fab from mice immunized with H7 stem nanoparticles-28 days post immunization
Method: single particle / : Huang J, Han J, Ward AB

EMDB-42535:
CryoEM structure of A/Perth/16/2009 H3
Method: single particle / : Huang J, Han J, Ward AB

EMDB-42536:
CryoEM map of A/Shanghai/1/2013 H7 HA
Method: single particle / : Huang J, Han J, Ward AB

PDB-8ut3:
CryoEM structure of A/Perth/16/2009 H3 in complex with flu HA central stem VH1-18 antibody UCA6
Method: single particle / : Huang J, Han J, Ward AB

PDB-8ut4:
CryoEM structure of A/Michigan/45/2015 H1 in complex with flu HA central stem VH1-18 antibody 09-1B12
Method: single particle / : Huang J, Han J, Ward AB

PDB-8ut5:
CryoEM structure of A/Michigan/45/2015 H1 in complex with flu HA central stem VH1-18 antibody UCA6_N55T
Method: single particle / : Huang J, Han J, Ward AB

PDB-8ut6:
CryoEM structure of A/Perth/16/2009 H3 in complex with polyclonal Fab from mice immunized with H3 stem nanoparticles-15 days post immunization
Method: single particle / : Huang J, Han J, Ward AB

PDB-8ut7:
CryoEM structure of A/Perth/16/2009 H3 in complex with polyclonal Fab from mice immunized with H3 stem nanoparticles-28 days post immunization
Method: single particle / : Huang J, Han J, Ward AB

PDB-8ut8:
CryoEM structure of A/Shanghai/1/2013 H7 in complex with polyclonal Fab from mice immunized with H7 stem nanoparticles-15 days post-immunization
Method: single particle / : Huang J, Han J, Ward AB

PDB-8ut9:
CryoEM structure of A/Shanghai/1/2013 H7 in complex with polyclonal Fab from mice immunized with H7 stem nanoparticles-28 days post immunization
Method: single particle / : Huang J, Han J, Ward AB

EMDB-16929:
Cryo-EM structure of Pyrococcus furiosus transcription elongation complex bound to Spt4/5
Method: single particle / : Tarau DM, Reichelt R, Heiss FB, Pilsl M, Hausner W, Engel C, Grohmann D

EMDB-17130:
Cryo-EM structure of Pyrococcus furiosus apo form RNA polymerase open clamp conformation
Method: single particle / : Tarau DM, Reichelt R, Heiss FB, Pilsl M, Hausner W, Engel C, Grohmann D

EMDB-17366:
Cryo-EM structure of Pyrococcus furiosus apo form RNA polymerase contracted clamp conformation with Spt4/5
Method: single particle / : Tarau DM, Reichelt R, Heiss FB, Pilsl M, Hausner W, Engel C, Grohmann D

EMDB-19033:
Cryo-EM structure of Pyrococcus furiosus apo form RNA polymerase contracted clamp conformation
Method: single particle / : Tarau DM, Reichelt R, Heiss FB, Pilsl M, Hausner W, Engel C, Grohmann D

EMDB-16809:
Cryo-EM structure of Pyrococcus furiosus transcription elongation complex
Method: single particle / : Tarau DM, Reichelt R, Heiss FB, Pilsl M, Hausner W, Engel C, Grohmann D

EMDB-34377:
Cryo-EM structure of human Pannexin-3 R36S/F40R variant in pre-open state
Method: single particle / : Cong Y, Jin X, Kong F, Wu T, Yan C

PDB-8gyt:
Cryo-EM structure of human Pannexin-3 R36S/F40R variant in pre-open state.
Method: single particle / : Cong Y, Jin X, Kong F, Wu T, Yan C

EMDB-17375:
Neisseria meningitidis Type IV pilus SB-GATDH variant
Method: helical / : Fernandez-Martinez D, Dumenil G

EMDB-17384:
Neisseria meningitidis Type IV pilus SB-DATDH variant
Method: helical / : Fernandez-Martinez D, Dumenil G

EMDB-17386:
Neisseria meningitidis Type IV pilus SA-GATDH variant
Method: helical / : Fernandez-Martinez D, Dumenil G

EMDB-17683:
Neisseria meningitidis Type IV pilus SB-GATDH variant bound to the C24 nanobody
Method: helical / : Fernandez-Martinez D, Dumenil G

EMDB-17695:
Neisseria meningitidis Type IV pilus SB-DATDH variant bound to the C24 nanobody
Method: helical / : Fernandez-Martinez D, Dumenil G

EMDB-17718:
Neisseria meningitidis PilE, SB-GATDH variant, bound to the F10 nanobody
Method: helical / : Fernandez-Martinez D, Dumenil G

PDB-8p2v:
Neisseria meningitidis Type IV pilus SB-GATDH variant
Method: helical / : Fernandez-Martinez D, Dumenil G

PDB-8p36:
Neisseria meningitidis Type IV pilus SB-DATDH variant
Method: helical / : Fernandez-Martinez D, Dumenil G

PDB-8p3b:
Neisseria meningitidis Type IV pilus SA-GATDH variant
Method: helical / : Fernandez-Martinez D, Dumenil G

PDB-8pij:
Neisseria meningitidis Type IV pilus SB-GATDH variant bound to the C24 nanobody
Method: helical / : Fernandez-Martinez D, Dumenil G

PDB-8piz:
Neisseria meningitidis Type IV pilus SB-DATDH variant bound to the C24 nanobody
Method: helical / : Fernandez-Martinez D, Dumenil G

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more