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- EMDB-4300: Structure of a prehandover mammalian ribosomal SRP and SRP recept... -

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Basic information

Entry
Database: EMDB / ID: EMD-4300
TitleStructure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex
Map data
Sample
  • Complex: Translating ribosome bound to SRP and SRP receptor
    • Complex: Ribosome
      • RNA: x 4 types
      • Protein or peptide: x 45 types
    • Complex: SRP
      • RNA: x 1 types
      • Protein or peptide: x 6 types
    • Complex: SRP receptorSignal recognition particle receptor
      • Protein or peptide: x 2 types
    • Complex: Signal sequence
  • Ligand: x 4 types
Function / homology
Function and homology information


SRP-dependent cotranslational protein targeting to membrane / signal recognition particle receptor complex / SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition / endoplasmic reticulum signal peptide binding / signal recognition particle, endoplasmic reticulum targeting / signal recognition particle binding / granulocyte differentiation / negative regulation of translational elongation / signal-recognition-particle GTPase / protein targeting to ER ...SRP-dependent cotranslational protein targeting to membrane / signal recognition particle receptor complex / SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition / endoplasmic reticulum signal peptide binding / signal recognition particle, endoplasmic reticulum targeting / signal recognition particle binding / granulocyte differentiation / negative regulation of translational elongation / signal-recognition-particle GTPase / protein targeting to ER / SRP-dependent cotranslational protein targeting to membrane, translocation / 7S RNA binding / exocrine pancreas development / SRP-dependent cotranslational protein targeting to membrane / TPR domain binding / ribonucleoprotein complex binding / cytoplasmic microtubule / neutrophil chemotaxis / GDP binding / ribosome binding / nuclear speck / GTPase activity / GTP binding / endoplasmic reticulum membrane / nucleolus / endoplasmic reticulum / ATP hydrolysis activity / nucleoplasm / nucleus / cytosol
Similarity search - Function
Signal recognition particle receptor, alpha subunit, N-terminal / Signal recognition particle, alpha subunit, N-terminal / Signal recognition particle, SRP72 subunit, RNA-binding / Signal recognition particle receptor, beta subunit / Signal recognition particle, SRP72 subunit / Putative TPR-like repeat / SRP72 RNA-binding domain / Signal recognition particle receptor beta subunit / Putative TPR-like repeat / Signal recognition particle, SRP9 subunit ...Signal recognition particle receptor, alpha subunit, N-terminal / Signal recognition particle, alpha subunit, N-terminal / Signal recognition particle, SRP72 subunit, RNA-binding / Signal recognition particle receptor, beta subunit / Signal recognition particle, SRP72 subunit / Putative TPR-like repeat / SRP72 RNA-binding domain / Signal recognition particle receptor beta subunit / Putative TPR-like repeat / Signal recognition particle, SRP9 subunit / SRP9 domain / Signal recognition particle SRP9 / Signal recognition particle 9 kDa protein (SRP9) / Signal recognition particle, SRP14 subunit / Signal recognition particle, SRP9/SRP14 subunit / Signal recognition particle 14kD protein / Signal recognition particle subunit SRP68 / Signal recognition particle subunit SRP68, RNA-binding domain / SRP68, N-terminal domain superfamily / RNA-binding signal recognition particle 68 / Signal recognition particle, SRP54 subunit, eukaryotic / Signal recognition particle, SRP19 subunit / Signal recognition particle, subunit SRP19-like superfamily / SRP19 protein / SRP/SRP receptor, N-terminal / Signal recognition particle, SRP54 subunit / Signal recognition particle, SRP54 subunit, M-domain / Signal recognition particle, SRP54 subunit, M-domain superfamily / Signal peptide binding domain / SRP54-type proteins GTP-binding domain signature. / Signal recognition particle SRP54, helical bundle / Signal recognition particle SRP54, N-terminal domain superfamily / SRP54-type protein, helical bundle domain / SRP54-type protein, helical bundle domain / Signal recognition particle, SRP54 subunit, GTPase domain / SRP54-type protein, GTPase domain / SRP54-type protein, GTPase domain / Longin-like domain superfamily / Tetratricopeptide repeat / TPR repeat region circular profile. / TPR repeat profile. / Tetratricopeptide repeats / Tetratricopeptide repeat / Tetratricopeptide-like helical domain superfamily / ATPases associated with a variety of cellular activities / AAA+ ATPase domain / P-loop containing nucleoside triphosphate hydrolase
Similarity search - Domain/homology
Signal recognition particle receptor subunit beta / SRP receptor subunit alpha / Signal recognition particle 19 kDa protein / Signal recognition particle 14 kDa protein / Signal recognition particle 9 kDa protein / Signal recognition particle subunit SRP72 / Signal recognition particle subunit SRP54 / Signal recognition particle subunit SRP68
Similarity search - Component
Biological speciesOryctolagus cuniculus (rabbit) / Canis lupus familiaris (dog) / Saccharomyces cerevisiae (brewer's yeast) / Rabbit (rabbit) / Dog (dog)
Methodsingle particle reconstruction / cryo EM / Resolution: 3.7 Å
AuthorsKobayashi K / Jomaa A / Ban N
CitationJournal: Science / Year: 2018
Title: Structure of a prehandover mammalian ribosomal SRP·SRP receptor targeting complex.
Authors: Kan Kobayashi / Ahmad Jomaa / Jae Ho Lee / Sowmya Chandrasekar / Daniel Boehringer / Shu-Ou Shan / Nenad Ban /
Abstract: Signal recognition particle (SRP) targets proteins to the endoplasmic reticulum (ER). SRP recognizes the ribosome synthesizing a signal sequence and delivers it to the SRP receptor (SR) on the ER ...Signal recognition particle (SRP) targets proteins to the endoplasmic reticulum (ER). SRP recognizes the ribosome synthesizing a signal sequence and delivers it to the SRP receptor (SR) on the ER membrane followed by the transfer of the signal sequence to the translocon. Here, we present the cryo-electron microscopy structure of the mammalian translating ribosome in complex with SRP and SR in a conformation preceding signal sequence handover. The structure visualizes all eukaryotic-specific SRP and SR proteins and reveals their roles in stabilizing this conformation by forming a large protein assembly at the distal site of SRP RNA. We provide biochemical evidence that the guanosine triphosphate hydrolysis of SRP·SR is delayed at this stage, possibly to provide a time window for signal sequence handover to the translocon.
History
DepositionFeb 16, 2018-
Header (metadata) releaseMar 28, 2018-
Map releaseMar 28, 2018-
UpdateMay 2, 2018-
Current statusMay 2, 2018Processing site: PDBe / Status: Released

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Structure visualization

Movie
  • Surface view with section colored by density value
  • Surface level: 0.064
  • Imaged by UCSF Chimera
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  • Surface view colored by height
  • Surface level: 0.064
  • Imaged by UCSF Chimera
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  • Surface view with fitted model
  • Atomic models: PDB-6frk
  • Surface level: 0.064
  • Imaged by UCSF Chimera
  • Download
  • Simplified surface model + fitted atomic model
  • Atomic modelsPDB-6frk
  • Imaged by Jmol
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Movie viewer
Structure viewerEM map:
SurfViewMolmilJmol/JSmol
Supplemental images

emd_4300.png

Downloads & links

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Map

FileDownload / File: emd_4300.map.gz / Format: CCP4 / Size: 125 MB / Type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
Voxel sizeX=Y=Z: 1.39 Å
Density
Contour LevelBy AUTHOR: 0.064 / Movie #1: 0.064
Minimum - Maximum-0.30947837 - 0.50414824
Average (Standard dev.)0.0016471847 (±0.0280388)
SymmetrySpace group: 1
Details

EMDB XML:

Map geometry
Axis orderXYZ
Origin000
Dimensions320320320
Spacing320320320
CellA=B=C: 444.8 Å
α=β=γ: 90.0 °

CCP4 map header:

modeImage stored as Reals
Å/pix. X/Y/Z1.391.391.39
M x/y/z320320320
origin x/y/z0.0000.0000.000
length x/y/z444.800444.800444.800
α/β/γ90.00090.00090.000
MAP C/R/S123
start NC/NR/NS000
NC/NR/NS320320320
D min/max/mean-0.3090.5040.002

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Supplemental data

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Half map: #1

Fileemd_4300_half_map_1.map
Projections & Slices
AxesZYX

Projections

Slices (1/2)
Density Histograms

Histogram

Histogram (log scale)

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Half map: #2

Fileemd_4300_half_map_2.map
Projections & Slices
AxesZYX

Projections

Slices (1/2)
Density Histograms

Histogram

Histogram (log scale)

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Sample components

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Entire : Translating ribosome bound to SRP and SRP receptor

EntireName: Translating ribosome bound to SRP and SRP receptor
Components
  • Complex: Translating ribosome bound to SRP and SRP receptor
    • Complex: Ribosome
      • RNA: tRNATransfer RNA
      • Protein or peptide: Ribosomal protein eL28
      • Protein or peptide: Ribosomal protein L12
      • RNA: 28S ribosomal RNA
      • Protein or peptide: 60S acidic ribosomal protein P0
      • RNA: 5S ribosomal RNA
      • RNA: 5.8S ribosomal RNA
      • Protein or peptide: Ribosomal protein L8
      • Protein or peptide: Ribosomal protein uL3
      • Protein or peptide: Ribosomal protein uL4
      • Protein or peptide: Ribosomal protein uL18
      • Protein or peptide: Ribosomal protein eL6
      • Protein or peptide: Ribosomal protein uL30
      • Protein or peptide: Ribosomal protein eL8
      • Protein or peptide: Ribosomal protein uL6
      • Protein or peptide: Ribosomal protein uL16
      • Protein or peptide: Ribosomal protein uL5
      • Protein or peptide: Ribosomal protein eL13
      • Protein or peptide: Ribosomal protein eL14
      • Protein or peptide: Ribosomal protein L15
      • Protein or peptide: Ribosomal protein uL13
      • Protein or peptide: Ribosomal protein uL22
      • Protein or peptide: Ribosomal protein eL18
      • Protein or peptide: Ribosomal protein eL19
      • Protein or peptide: Ribosomal protein eL20
      • Protein or peptide: Ribosomal protein eL21
      • Protein or peptide: Ribosomal protein eL22
      • Protein or peptide: Ribosomal protein L23
      • Protein or peptide: Ribosomal protein eL24
      • Protein or peptide: Ribosomal protein uL23
      • Protein or peptide: Ribosomal protein uL24
      • Protein or peptide: 60S ribosomal protein L27
      • Protein or peptide: Ribosomal protein uL15
      • Protein or peptide: 60S ribosomal protein L29
      • Protein or peptide: Ribosomal protein eL30
      • Protein or peptide: Ribosomal protein eL31
      • Protein or peptide: Ribosomal protein eL32
      • Protein or peptide: Ribosomal protein eL33
      • Protein or peptide: Ribosomal protein eL34
      • Protein or peptide: Ribosomal protein uL29
      • Protein or peptide: Ribosomal protein eL36
      • Protein or peptide: Ribosomal protein L37
      • Protein or peptide: Ribosomal protein eL38
      • Protein or peptide: Ribosomal protein eL39
      • Protein or peptide: Ribosomal protein eL40
      • Protein or peptide: Ribosomal protein eL41
      • Protein or peptide: Ribosomal protein eL42
      • Protein or peptide: Ribosomal protein eL43
      • Protein or peptide: Signal sequence
    • Complex: SRP
      • RNA: Canis lupus familiaris RNA, 7SL, cytoplasmic 1 (RN7SL1), SRP RNA
      • Protein or peptide: Signal recognition particle subunit SRP19
      • Protein or peptide: Signal recognition particle subunit SRP72,Signal recognition particle subunit SRP72,Signal recognition particle subunit SRP72
      • Protein or peptide: Signal recognition particle subunit SRP68
      • Protein or peptide: Signal recognition particle 9 kDa protein
      • Protein or peptide: Signal recognition particle 54 kDa protein
      • Protein or peptide: Signal recognition particle 14 kDa protein
    • Complex: SRP receptorSignal recognition particle receptor
      • Protein or peptide: SRP receptor beta subunit
      • Protein or peptide: SRP receptor alpha subunit
    • Complex: Signal sequence
  • Ligand: MAGNESIUM ION
  • Ligand: ZINC ION
  • Ligand: GUANOSINE-5'-TRIPHOSPHATEGuanosine triphosphate
  • Ligand: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER

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Supramolecule #1: Translating ribosome bound to SRP and SRP receptor

SupramoleculeName: Translating ribosome bound to SRP and SRP receptor / type: complex / ID: 1 / Parent: 0 / Macromolecule list: #1-#58

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Supramolecule #2: Ribosome

SupramoleculeName: Ribosome / type: complex / ID: 2 / Parent: 1 / Macromolecule list: #2-#49, #52
Source (natural)Organism: Oryctolagus cuniculus (rabbit)

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Supramolecule #3: SRP

SupramoleculeName: SRP / type: complex / ID: 3 / Parent: 1 / Macromolecule list: #1, #50-#51, #53, #55-#56, #58
Source (natural)Organism: Canis lupus familiaris (dog)

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Supramolecule #4: SRP receptor

SupramoleculeName: SRP receptor / type: complex / ID: 4 / Parent: 1 / Macromolecule list: #54, #57
Source (natural)Organism: Oryctolagus cuniculus (rabbit)
Recombinant expressionOrganism: Escherichia coli (E. coli)

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Supramolecule #5: Signal sequence

SupramoleculeName: Signal sequence / type: complex / ID: 5 / Parent: 1 / Macromolecule list: #52
Source (natural)Organism: Saccharomyces cerevisiae (brewer's yeast)
Recombinant expressionOrganism: Oryctolagus cuniculus (rabbit)

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Macromolecule #1: Canis lupus familiaris RNA, 7SL, cytoplasmic 1 (RN7SL1), SRP RNA

MacromoleculeName: Canis lupus familiaris RNA, 7SL, cytoplasmic 1 (RN7SL1), SRP RNA
type: rna / ID: 1 / Number of copies: 1
Source (natural)Organism: Canis lupus familiaris (dog)
Molecular weightTheoretical: 96.826289 KDa
SequenceString: GCCGGGCGCG GUGGCGCGCG CCUGUAGUCC CAGCUACUCG GGAGGCUGAG GCAGGAGGAU CGCUUGAGCC CAGGAGUUCU GGGCUGCAG UGCGCUAUGC CGAUCGGGUG UCCGCACUAA GUUCGGCAUC AAUAUGGUGA CCUCCCGGGA GCGGGGGACC A CCAGGUUG ...String:
GCCGGGCGCG GUGGCGCGCG CCUGUAGUCC CAGCUACUCG GGAGGCUGAG GCAGGAGGAU CGCUUGAGCC CAGGAGUUCU GGGCUGCAG UGCGCUAUGC CGAUCGGGUG UCCGCACUAA GUUCGGCAUC AAUAUGGUGA CCUCCCGGGA GCGGGGGACC A CCAGGUUG CCUAAGGAGG GGUGAACCGG CCCAGGUCGG AAACGGAGCA GGUCAAAACU CCCGUGCUGA UCAGUAGUGG GA UCGCGCC UGUGAAUAGC CACUGCACUC CAGCCUGGGC AACAUAGCGA GACCCCGUCU CU

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Macromolecule #2: tRNA

MacromoleculeName: tRNA / type: rna / ID: 2 / Number of copies: 1
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 24.437535 KDa
SequenceString:
GUUUCCGUAG UGUAGUGGUU AUCACGUUCG CCUAACACGC GAAAGGUCCC CGGUUCGAAA CCGGGCGGAA ACACCA

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Macromolecule #5: 28S ribosomal RNA

MacromoleculeName: 28S ribosomal RNA / type: rna / ID: 5 / Number of copies: 1
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 1.185357625 MDa
SequenceString: CGCGACCUCA GAUCAGACGU GGCGACCCGC UGAAUUUAAG CAUAUUAGUC AGCGGAGGAG AAGAAACUAA CCAGGAUUCC CUCAGUAAC GGCGAGUGAA CAGGGAAGAG CCCAGCGCCG AAUCCCCGCC CCGCGGCGGG GCGCGGGACA UGUGGCGUAC G GAAGACCC ...String:
CGCGACCUCA GAUCAGACGU GGCGACCCGC UGAAUUUAAG CAUAUUAGUC AGCGGAGGAG AAGAAACUAA CCAGGAUUCC CUCAGUAAC GGCGAGUGAA CAGGGAAGAG CCCAGCGCCG AAUCCCCGCC CCGCGGCGGG GCGCGGGACA UGUGGCGUAC G GAAGACCC GCUCCCCGGC GCCGCUCGUG GGGGGCCCAA GUCCUUCUGA UCGAGGCCCA GCCCGUGGAC GGUGUGAGGC CG GUAGCGG CCCCCGGCGC GCCGGGCCCG GGUCUUCCCG GAGUCGGGUU GCUUGGGAAU GCAGCCCAAA GCGGGUGGUA AAC UCCAUC UAAGGCUAAA UACCGGCACG AGACCGAUAG UCAACAAGUA CCGUAAGGGA AAGUUGAAAA GAACUUUGAA GAGA GAGUU CAAGAGGGCG UGAAACCGUU AAGAGGUAAA CGGGUGGGGU CCGCGCAGUC CGCCCGGAGG AUUCAACCCG GCGGC GGGU CCGGCCGUGU CGGCGGCCCG GCGGAUCUUU CCCGCGCGGG GGACCGUCCC CCGACCGGCG ACCGGCCGCC GCCGGG CGC AUUUCCACCG CGGCGGUGCG CCGCGACCGG CUCCGGGACG GCUGGGAAGG CCCGGCGGGG AAGGUGGCUC GGCCGAG UG UUACAGCCCC CCCGGCAGCA GCACUCGCCG AAUCCCGGGG CCGAGGGAGC GAGACCCGUC GCCGCGCUCU CCCCCCUC C CGGCGCCGCC GGGGGGGGCC GGGCCACCCC UCCCACGGCG CGACCGCUCG GGGCGGACUG UCCCCAGUGC GCCCCGGGC GGGUCGCGCC GUCGGGCCCG GGGGAGGGGC CACGCGCGCG UCCCCCGAAG AGGGGGACGG CGGAGCGAGC GCACGGGGUC GGCGGCGAC GUCGGCUACC CACCCGACCC GUCUUGAAAC ACGGACCAAG GAGUCUAACA CGUGCGCGAG UCGGGGGCUC G CACGAAAG CCGCCGUGGC GCAAUGAAGG UGAAGGCCGG CGCGCUCGCC GGCCGAGGUG GGAUCCCGAG GCCUCUCCAG UC CGCCGAG GGCGCACCAC CGGCCCGUCU CGCCCGCCGC GCCGGGGAGG UGGAGCACGA GCGCACGUGU UAGGACCCGA AAG AUGGUG AACUAUGCCU GGGCAGGGCG AAGCCAGAGG AAACUCUGGU GGAGGUCCGU AGCGGUCCUG ACGUGCAAAU CGGU CGUCC GACCUGGGUA UAGGGGCGAA AGACUAAUCG AACCAUCUAG UAGCUGGUUC CCUCCGAAGU UUCCCUCAGG AUAGC UGGC GCUCUCGCAC ACGCAGUUUU AUCCGGUAAA GCGAAUGAUU AGAGGUCUUG GGGCCGAAAC GAUCUCAACC UAUUCU CAA ACUUUAAAUG GGUAAGAAGC CCGGCUCGCU GGCGUGAGCC GGGCGUGGAA UGGAGUGCCU AGUGGGCCAC UUUUGGU AA GCAGAACUGG CGCUGCGGGA UGAACCGAAC GCCGGGUUAA GGCGCCCGAU GCCGACGCUC AUCAGACCCC AGAAAAGG U GUUGGUUGAU AUAGACAGCA GGACGGUGGC CAUGGAAGUC GGAAUCCGCU AAGGAGUGUG UAACAACUCA CCUGCCGAA UCAACUAGCC CUGAAAAUGG AUGGCGCUGG AGCGUCGGGC CCAUACCCGG CCGUCGCCGG CAGUCGAGAG UGGACGGGAG CGGCGGGGG CGGCGCGCGC GCGCGCCCGC CCCCGGAGCC CCGCGGACGC UACGCCGCGA CGAGUAGGAG GGCCGCUGCG G UGAGCCUU GAAGCCUAGG GCGCGGGCCC GGGUGGAGCC GCCGCAGGUG CAGAUCUUGG UGGUAGUAGC AAAUAUUCAA AC GAGAACU UUGAAGGCCG AAGUGGAGAA GGGUUCCAUG UGAACAGCAG UUGAACAUGG GUCAGUCGGU CCUGAGAGAU GGG CGAGCG CCGUUCCGAA GGGACGGGCG AUGGCCUCCG UUGCCCUCGG CCGAUCGAAA GGGAGUCGGG UUCAGAUCCC CGAA UCCGG AGUGGCGGAG AUGGGCGCCG CGAGGCGUCC AGUGCGGUAA CGCGACCGAU CCCGGAGAAG CCGGCGGGAG CCCCG GGGA GAGUUCUCUU UUCUUUGUGA AGGGCAGGGC GCCCUGGAAU GGGUUCGCCC CGAGAGAGGG GCCCGUGCCU UGGAAA GCG UCGCGGUUCC GGCGGCGUCC GGUGAGCUCU CGCUGGCCCU UGAAAAUCCG GGGGAGAGGG UGUAAAUCUC GCGCCGG GC CGUACCCAUA UCCGCAGCAG GUCUCCAAGG UGAACAGCCU CUGGCAUGUU GGAACAAUGU AGGUAAGGGA AGUCGGCA A GCCGGAUCCG UAACUUCGGG AUAAGGAUUG GCUCUAAGGG CUGGGUCGGU CGUCGGCCGG CGCCUAGCAG CCGACUUAG AACUGGUGCG GACCAGGGGA AUCCGACUGU UUAAUUAAAA CAAAGCAUCG CGAAGGCCCG CGGCGGGUGU UGACGCGAUG UGAUUUCUG CCCAGUGCUC UGAAUGUCAA AGUGAAGAAA UUCAAUGAAG CGCGGGUAAA CGGCGGGAGU AACUAUGACU C UCUUAAGG UAGCCAAAUG CCUCGUCAUC UAAUUAGUGA CGCGCAUGAA UGGAUGAACG AGAUUCCCAC UGUCCCUACC UA CUAUCCA GCGAAACCAC AGCCAAGGGA ACGGGCUUGG CGGAAUCAGC GGGGAAAGAA GACCCUGUUG AGCUUGACUC UAG UCUGGC ACGGUGAAGA GACAUGUUUU UUCACUGACC CGGUGAGGCG GGGGGGCGAG CCCCGAGGGG CUCUCGCUUC UGGC GCCAA GCGCCCGGCC GCGCGCCGGC CGGGCGCGAC CCGCUCCGGG GACAGUGCCA GGUGGGGAGU UUGACUGGGG CGGUA CACC UGUCAAACGG UAACGCAGGU GUCCUAAGGC GAGCUCAGGG AGGACAGAAA CCUCCCGUGG AGCAGAAGGG CAAAAG CUC GCUUGAUCUU GAUUUUCAGU ACGAAUACAG ACCGUGAAAG CGGGGCCUCA CGAUCCUUCU GACCUUUUGG GUUUUAA GC AGGAGGUGUC AGAAAAGUUA CCACAGGGAU AACUGGCUUG UGGCGGCCAA GCGUUCAUAG CGACGUCGCU UUUUGAUC C UUCGAUGUCG GCUCUUCCUA UCAUUGUGAA GCAGAAUUCA CCAAGCGUUG GAUUGUUCAC CCACUAAUAG GGAACGUGA GCUGGGUUUA GACCGUCGUG AGACAGGUUA GUUUUACCCU ACUGAUGAUG UGUUGUUGCC AUGGUAAUCC UGCUCAGUAC GAGAGGAAC CGCAGGUUCA GACAUUUGGU GUAUGUGCUU GGCUGAGGAG CCAAUGGGGC GAAGCUACCA UCUGUGGGAU U AUGACUGA ACGCCUCUAA GUCAGAAUCC CGCCCAGGCG GAACGAUACG GCAGCGCCGC GGAGCCUCGG UUGGCCUCGG AU AGCCGGU CCCCCGCGGG GUCCGGUGCG GAGUGCCCUU CGUCCUGGGA AACGGGGCGC GGCCGGAGAG GCGGCCGCCC CCU CGCCCG UCACGCACGC CGUUCGUGGG GAACCUGGCG CUAAACCAUU CGUAGACGAC CUGCUUCUGG GUCGGGGUUU CGUA CGUAG CAGAGCAGCU CGCUGCGAUC UAUUGAAAGU CAGCCCUCGA CACAAGGGUU UGU

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Macromolecule #7: 5S ribosomal RNA

MacromoleculeName: 5S ribosomal RNA / type: rna / ID: 7 / Number of copies: 1
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 38.691914 KDa
SequenceString:
GUCUACGGCC AUACCACCCU GAACGCGCCC GAUCUCGUCU GAUCUCGGAA GCUAAGCAGG GUCGGGCCUG GUUAGUACUU GGAUGGGAG ACCGCCUGGG AAUACCGGGU GCUGUAGGCU U

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Macromolecule #8: 5.8S ribosomal RNA

MacromoleculeName: 5.8S ribosomal RNA / type: rna / ID: 8 / Number of copies: 1
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 50.143648 KDa
SequenceString:
CGACUCUUAG CGGUGGAUCA CUCGGCUCGU GCGUCGAUGA AGAACGCAGC UAGCUGCGAG AAUUAAUGUG AAUUGCAGGA CACAUUGAU CAUCGACACU UCGAACGCAC UUGCGGCCCC GGGUUCCUCC CGGGGCUACG CCUGUCUGAG CGUCGCU

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Macromolecule #3: Ribosomal protein eL28

MacromoleculeName: Ribosomal protein eL28 / type: protein_or_peptide / ID: 3 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 14.301777 KDa
SequenceString:
SAHLQWMVVR NCSSFLIKRN KQTYSTEPNN LKARNSFRYN GLIHHKTVGV EPAADGKGVV VVIKRRSGQR KPATSYVRTT INKNARATL SSIRHMIRKN KYRPDLRMAA IRRASAILRS QKPVMV

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Macromolecule #4: Ribosomal protein L12

MacromoleculeName: Ribosomal protein L12 / type: protein_or_peptide / ID: 4 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 17.689461 KDa
SequenceString:
MPPKFDPNEI KVVYLRCTGG EVGATSALAP KIGPLGLSPK KVGDDIAKAT GDWKGLRITV KLTIQNRQAQ IEVVPSASAL IIKALKEPP RDRKKQKNIK HSGNITFDEI VNIARQMRHR SLARELSGTI KEILGTAQSV GCNVDGRHPH DIIDDINSGA V ECP

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Macromolecule #6: 60S acidic ribosomal protein P0

MacromoleculeName: 60S acidic ribosomal protein P0 / type: protein_or_peptide / ID: 6 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 22.21784 KDa
SequenceString: DRATWKSNYF LKIIQLLDDY PKCFIVGADN VGSKQMQQIR MSLRGKAVVL MGKNTMMRKA IRGHLENNPA LEKLLPHIRG NVGFVFTKE DLTEIRDMLR ANKVPAAARA GAIAPCEVTV PAQNTGLGPE KTSFFQALGI TTKISRGTIE ILSDVQLIKT G DKVGASEA ...String:
DRATWKSNYF LKIIQLLDDY PKCFIVGADN VGSKQMQQIR MSLRGKAVVL MGKNTMMRKA IRGHLENNPA LEKLLPHIRG NVGFVFTKE DLTEIRDMLR ANKVPAAARA GAIAPCEVTV PAQNTGLGPE KTSFFQALGI TTKISRGTIE ILSDVQLIKT G DKVGASEA TLLNMLNISP FSFGLVIQQV FDNGSIYNPE VLDI

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Macromolecule #9: Ribosomal protein L8

MacromoleculeName: Ribosomal protein L8 / type: protein_or_peptide / ID: 9 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 26.570105 KDa
SequenceString: GRVIRGQRKG AGSVFRAHVK HRKGAARLRA VDFAERHGYI KGIVKDIIHD PGRGAPLAKV VFRDPYRFKK RTELFIAAEG IHTGQFVYC GKKAQLNIGN VLPVGTMPEG TIVCCLEEKP GDRGKLARAS GNYATVISHN PETKKTRVKL PSGSKKVISS A NRAVVGVV ...String:
GRVIRGQRKG AGSVFRAHVK HRKGAARLRA VDFAERHGYI KGIVKDIIHD PGRGAPLAKV VFRDPYRFKK RTELFIAAEG IHTGQFVYC GKKAQLNIGN VLPVGTMPEG TIVCCLEEKP GDRGKLARAS GNYATVISHN PETKKTRVKL PSGSKKVISS A NRAVVGVV AGGGRIDKPI LKAGRAYHKY KAKRNCWPRV RGVAMNPVEH PFGGGNHQHI GKPSTIRRDA PAGRKVGLIA AR RTGR

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Macromolecule #10: Ribosomal protein uL3

MacromoleculeName: Ribosomal protein uL3 / type: protein_or_peptide / ID: 10 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 44.759359 KDa
SequenceString: SHRKFSAPRH GSLGFLPRKR SSRHRGKVKS FPKDDSSKPV HLTAFLGYKA GMTHIVREVD RPGSKVNKKE VVEAVTIVET PPMIVVGIV GYVETPRGLR TFKTIFAEHI SDECKRRFYK NWHKSKKKAF TKYCKKWQDA AGAAALAADF SSMKAYCQVI R VIAHTQMR ...String:
SHRKFSAPRH GSLGFLPRKR SSRHRGKVKS FPKDDSSKPV HLTAFLGYKA GMTHIVREVD RPGSKVNKKE VVEAVTIVET PPMIVVGIV GYVETPRGLR TFKTIFAEHI SDECKRRFYK NWHKSKKKAF TKYCKKWQDA AGAAALAADF SSMKAYCQVI R VIAHTQMR LLPLRQKKAH LMEIQVNGGT VAEKLDWARE RLEQQVPVNQ VFGQDEMIDV IGVTKGKGYK GVTSRWHTKK LP RKTHRGL RKVACIGAWH PARVAFSVAR AGQKGYHHRT EINKKIYKIG QGYLIKDGKL IKNNASTDYD LSDKSINPLG GFV HYGEVT NDFVMLKGCV VGTKKRVLTL RKSLLVQTKR RALEKIDLKF IDTTSKFGHG RFQTVEEKKA FMGPLKKD

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Macromolecule #11: Ribosomal protein uL4

MacromoleculeName: Ribosomal protein uL4 / type: protein_or_peptide / ID: 11 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 41.635141 KDa
SequenceString: ACARPLISVY SEKGESSGKN VTLPAVFKAP IRPDIVNFVH TNLRKNNRQP YAVSELAGHQ TSAESWGTGR AVARIPRVRG GGTHRSGQG AFGNMCRGGR MFAPTKTWRR WHRRVNTTQK RYAICSALAA SALPALVMSK GHRIEEVPEL PLVVEDKVES Y KKTKEAVL ...String:
ACARPLISVY SEKGESSGKN VTLPAVFKAP IRPDIVNFVH TNLRKNNRQP YAVSELAGHQ TSAESWGTGR AVARIPRVRG GGTHRSGQG AFGNMCRGGR MFAPTKTWRR WHRRVNTTQK RYAICSALAA SALPALVMSK GHRIEEVPEL PLVVEDKVES Y KKTKEAVL LLKKLKAWND IKKVYASQRM RAGKGKMRNR RRIQRRGPCI IYNEDNGIIK AFRNIPGITL LNVSKLNILK LA PGGHVGR FCIWTESAFR KLDELYGTWR KAATLKSNYN LPMHKMLNTD LSRILKSPEI QRALRAPRKK IHRRVLKKNP LKN LRIMLK LNPYAKTMRR NTILRQARNH KIRMDKAAAA AAALKAKSGE K

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Macromolecule #12: Ribosomal protein uL18

MacromoleculeName: Ribosomal protein uL18 / type: protein_or_peptide / ID: 12 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 33.942223 KDa
SequenceString: FVKVVKNKAY FKRYQVKFRR RREGKTDYYA RKRLVIQDKN KYNTPKYRMI VRVTNRDIIC QIAYARIEGD MIVCAAYAHE LPKYGVKVG LTNYAAAYCT GLLLARRLLN RFGMDKIYEG QVEVTGDEYN VESIDGQPGA FTCYLDAGLA RTTTGNKVFG A LKGAVDGG ...String:
FVKVVKNKAY FKRYQVKFRR RREGKTDYYA RKRLVIQDKN KYNTPKYRMI VRVTNRDIIC QIAYARIEGD MIVCAAYAHE LPKYGVKVG LTNYAAAYCT GLLLARRLLN RFGMDKIYEG QVEVTGDEYN VESIDGQPGA FTCYLDAGLA RTTTGNKVFG A LKGAVDGG LSIPHSTKRF PGYDSESKEF NAEVHRKHIL GQNVADYMRY LIEEDEDAYK KQFSQYIKNN VTPDMMEEMY KK AHAAIRE NPVYEKKPKK EVKKKRWNRP KMSLAQKKDR VAQKKASFLR AQERA

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Macromolecule #13: Ribosomal protein eL6

MacromoleculeName: Ribosomal protein eL6 / type: protein_or_peptide / ID: 13 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 27.052178 KDa
SequenceString: PHCSRNPVLV RGIGRYSRSA MYSRMAMYKR KYSAAVLATV TKPVGGDKNG GTRVVKLRKM PRYYPTEDVP RKLLSHGKKP FSKHVRKLR ASITPGTILI ILTGRHRGKR VIFLKQLSSG LLLVTGPLVL NRVPLRRTHQ KFVIATSTKI DISGVKIPKH L TDAYFKKK ...String:
PHCSRNPVLV RGIGRYSRSA MYSRMAMYKR KYSAAVLATV TKPVGGDKNG GTRVVKLRKM PRYYPTEDVP RKLLSHGKKP FSKHVRKLR ASITPGTILI ILTGRHRGKR VIFLKQLSSG LLLVTGPLVL NRVPLRRTHQ KFVIATSTKI DISGVKIPKH L TDAYFKKK KLRKPRHQEG EIFDTEKEKY EISEQRKVDQ KAVDSQILRR IKAVPQLQGY LRSVFALTNG IYPHKLVF

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Macromolecule #14: Ribosomal protein uL30

MacromoleculeName: Ribosomal protein uL30 / type: protein_or_peptide / ID: 14 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 26.590725 KDa
SequenceString: NFAELKIKRL RKKFAQKMLR KARRKLIYEK AKHYHKEYRQ MYRTEIRMAR MARKAGNFYV PAEPKLAFVI RIRGINGVSP KVRKVLQLL RLRQIFNGTF VKLNKASINM LRIVEPYIAW GYPNLKSVNE LIYKRGYGKI NKKRIALTDN ALIARSLGKY G IICMEDLI ...String:
NFAELKIKRL RKKFAQKMLR KARRKLIYEK AKHYHKEYRQ MYRTEIRMAR MARKAGNFYV PAEPKLAFVI RIRGINGVSP KVRKVLQLL RLRQIFNGTF VKLNKASINM LRIVEPYIAW GYPNLKSVNE LIYKRGYGKI NKKRIALTDN ALIARSLGKY G IICMEDLI HEIYTVGKRF KEANNFLWPF KLSSPRGGMK KKTTHFVEGG DAGNREDQIN RLIRRMN

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Macromolecule #15: Ribosomal protein eL8

MacromoleculeName: Ribosomal protein eL8 / type: protein_or_peptide / ID: 15 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 27.258246 KDa
SequenceString: KVVNLLFEKR PKNFGIGQDI QPKRDLTRFV KWPRYIRLQR QRAILYKRLK VPPTINQFTQ ALDRQTATQL LKLTHKYRPE TKQEKKQRL LARAEKKAAG KGDVPTKRPP VLRAGVNTVT TLVENKKAQL VVIAHDVDPI ELVVFLPALC RKMGVPYCII K GKARLGRL ...String:
KVVNLLFEKR PKNFGIGQDI QPKRDLTRFV KWPRYIRLQR QRAILYKRLK VPPTINQFTQ ALDRQTATQL LKLTHKYRPE TKQEKKQRL LARAEKKAAG KGDVPTKRPP VLRAGVNTVT TLVENKKAQL VVIAHDVDPI ELVVFLPALC RKMGVPYCII K GKARLGRL VHRKTCTTVA FTQVNSEDKG ALAKLVEAIR TNYNDRYNEI RRHWGGNVLG PKSVARITKL EKAKAKELAT

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Macromolecule #16: Ribosomal protein uL6

MacromoleculeName: Ribosomal protein uL6 / type: protein_or_peptide / ID: 16 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 21.655268 KDa
SequenceString:
MKTILSNQTV DIPENVDITL KGRTVIVKGP RGTLRRDFNH INVELSLLGK KKKRLRVDKW WGNRKELATV RTICSHVQNM IKGVTLGFR YKMRSVYAHF PINVVIQENG SLVEIRNFLG EKYIRRVRMR PGVACSVSQA QKDELILEGN DIELVSNSAA L IQQATTVK NKDIRKFLDG IYVSEKGTVQ QA

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Macromolecule #17: Ribosomal protein uL16

MacromoleculeName: Ribosomal protein uL16 / type: protein_or_peptide / ID: 17 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 24.465791 KDa
SequenceString: GRRPARCYRY CKNKPYPKSR FCRGVPDAKI RIFDLGRKKA KVDEFPLGGH MVSDEYEQLS SEALEAARIC ANKYMVKSCG RDGFHMRVR LHPFHVIRIN KMLSCAGADR LQTGMRGAFG KPQGTVARVH IGQVIMSIRT KLQNEEHVIE ALRRAKFKFP G RQKIHISK ...String:
GRRPARCYRY CKNKPYPKSR FCRGVPDAKI RIFDLGRKKA KVDEFPLGGH MVSDEYEQLS SEALEAARIC ANKYMVKSCG RDGFHMRVR LHPFHVIRIN KMLSCAGADR LQTGMRGAFG KPQGTVARVH IGQVIMSIRT KLQNEEHVIE ALRRAKFKFP G RQKIHISK KWGFTKFNAD EFENMVAKKC LIPDGCGVKY VPNHGPLDKW RVLHS

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Macromolecule #18: Ribosomal protein uL5

MacromoleculeName: Ribosomal protein uL5 / type: protein_or_peptide / ID: 18 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 19.359393 KDa
SequenceString:
ENPMRELRIR KLCLNICVGE SGDRLTRAAK VLEQLTGQTP VFSKARYTVR SFGIRRNEKI AVHCTVRGAK AEEILEKGLK VREYELRKN NFSDTGNFGF GIQEHIDLGI KYDPSIGIYG LDFYVVLGRP GFSIADKKRR TGCIGAKHRI SKEEAMRWFQ Q KHDGIILP GN

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Macromolecule #19: Ribosomal protein eL13

MacromoleculeName: Ribosomal protein eL13 / type: protein_or_peptide / ID: 19 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 24.234566 KDa
SequenceString: APSRNGMILK PHFHKDWQRR VATWFNQPAR KIRRRKARQA KARRIAPRPA SGPLRPVVRC PTVRYHTKVR AGRGFSLEEL RVAGIHKKV ARTIGISVDP RRRNKCTESL QANVQRLKEY RSKLILFPRK PSAPKKGDSS AEELKLATQL TGPVMPIRNV Y KREKARVI ...String:
APSRNGMILK PHFHKDWQRR VATWFNQPAR KIRRRKARQA KARRIAPRPA SGPLRPVVRC PTVRYHTKVR AGRGFSLEEL RVAGIHKKV ARTIGISVDP RRRNKCTESL QANVQRLKEY RSKLILFPRK PSAPKKGDSS AEELKLATQL TGPVMPIRNV Y KREKARVI TDEEKNFKAF ASLRMARANA RLFGIRAKRA KEAAEQDVEK KK

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Macromolecule #20: Ribosomal protein eL14

MacromoleculeName: Ribosomal protein eL14 / type: protein_or_peptide / ID: 20 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 16.129309 KDa
SequenceString:
VFRRFVEVGR VAYVSFGPHA GKLVAIVDVI DQNRALVDGP CTQVRRQAMP FKCMQLTDFI LKFPHSARQK YVRKAWEKAD INAKWAATR WAKKIEAREK KAKMTDFDRY KVMKARKMRN RLIKLEVKKL QKAALLKAS

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Macromolecule #21: Ribosomal protein L15

MacromoleculeName: Ribosomal protein L15 / type: protein_or_peptide / ID: 21 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 24.076088 KDa
SequenceString: GAYKYIQELW RKKQSDVMRF LLRVRCWQYR QLSALHRAPR PTRPDKARRL GYKAKQGYVI YRIRVRRGGR KRPVPKGATY GKPVHHGVN QLKFARSLQS VAEERAGRHC GALRVLNSYW VGEDSTYKFF EVILIDPFHK AIRRNPDTQW ITKPVHKHRE M RGLTSAGR ...String:
GAYKYIQELW RKKQSDVMRF LLRVRCWQYR QLSALHRAPR PTRPDKARRL GYKAKQGYVI YRIRVRRGGR KRPVPKGATY GKPVHHGVN QLKFARSLQS VAEERAGRHC GALRVLNSYW VGEDSTYKFF EVILIDPFHK AIRRNPDTQW ITKPVHKHRE M RGLTSAGR KSRGLGKGHK FHHTIGGSRR AAWRRRNTLQ LHRYR

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Macromolecule #22: Ribosomal protein uL13

MacromoleculeName: Ribosomal protein uL13 / type: protein_or_peptide / ID: 22 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 23.43509 KDa
SequenceString: EGQVLVLDGR GHLLGRLAAI VAKQVLLGRK VVVVRCEGIN ISGNFYRNKL KYLAFLRKRM NTNPSRGPYH FRAPSRIFWR TVRGMLPHK TKRGQAALDR LKVFDGIPPP YDKKKRMVVP AALKVVRLKP TRKFAYLGRL AHEVGWKYQA VTATLEEKRK E KAKIHYRK ...String:
EGQVLVLDGR GHLLGRLAAI VAKQVLLGRK VVVVRCEGIN ISGNFYRNKL KYLAFLRKRM NTNPSRGPYH FRAPSRIFWR TVRGMLPHK TKRGQAALDR LKVFDGIPPP YDKKKRMVVP AALKVVRLKP TRKFAYLGRL AHEVGWKYQA VTATLEEKRK E KAKIHYRK KKQLMRLRKQ AEKNVEKKID RFTEVLKTHG FLV

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Macromolecule #23: Ribosomal protein uL22

MacromoleculeName: Ribosomal protein uL22 / type: protein_or_peptide / ID: 23 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 17.757627 KDa
SequenceString:
VRYSLDPENP TKSCKSRGSN LRVHFKNTRE TAQAIKGMHI RKATKYLKDV TLQKQCVPFR RYNGGVGRCA QAKQWGWTQG RWPKKSAEF LLHMLKNAES NAELKGLDVD SLVIEHIQVN KAPKMRRRTY RAHGRINPYM SSPCHIEMIL TEKE

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Macromolecule #24: Ribosomal protein eL18

MacromoleculeName: Ribosomal protein eL18 / type: protein_or_peptide / ID: 24 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 21.457391 KDa
SequenceString:
GVDIRHNKDR KVRRKEPKSQ DIYLRLLVKL YRFLARRTNS TFNQVVLKRL FMSRTNRPPL SLSRMIRKMK LPGREGKTAV VVGTITDDV RVQEVPKLKV CALRVSSRAR SRILKAGGKI LTFDQLALDS PKGCGTVLLS GPRKGREVYR HFGKAPGTPH S HTKPYVRS KGRKFERARG RRASRGYKN

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Macromolecule #25: Ribosomal protein eL19

MacromoleculeName: Ribosomal protein eL19 / type: protein_or_peptide / ID: 25 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 21.613033 KDa
SequenceString:
SMLRLQKRLA SSVLRCGKKK VWLDPNETNE IANANSRQQI RKLIKDGLII RKPVTVHSRA RCRKNTLARR KGRHMGIGKR KGTANARMP EKVTWMRRMR ILRRLLRRYR ESKKIDRHMY HSLYLKVKGN VFKNKRILME HIHKLKADKA RKKLLADQAE A RRSKTKEA RKRREERLQA KK

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Macromolecule #26: Ribosomal protein eL20

MacromoleculeName: Ribosomal protein eL20 / type: protein_or_peptide / ID: 26 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 20.696363 KDa
SequenceString:
KASGTLREYK VVGRCLPTPK CRTPPLYRMR IFAPNHVVAK SRFWYFVSQL KKMKKSSGEI VYCGQVFEKS PLRVKNFGIW LRYDSRSGT HNMYREYRDL TTAGAVTQCY RDMGARHRAR AHSIQIMKVE EIAASKCRRP AVKQFHDSKI KFPLPHRVLR R QHKPRFTT KRPNTFF

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Macromolecule #27: Ribosomal protein eL21

MacromoleculeName: Ribosomal protein eL21 / type: protein_or_peptide / ID: 27 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 18.478791 KDa
SequenceString:
TNTKGKRRGT RYMFSRPFRK HGVVPLATYM RIYKKGDIVD IKGMGTVQKG MPHKCYHGKT GRVYNVTQHA VGIVVNKQVK GKILAKRIN VRIEHIKHSK SRDSFLKRVK ENDQKKKEAK EKGTWVQLKR QPAPPREAHF VRTNGKEPEL LEPIPYEFMA

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Macromolecule #28: Ribosomal protein eL22

MacromoleculeName: Ribosomal protein eL22 / type: protein_or_peptide / ID: 28 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 11.481249 KDa
SequenceString:
QVLKFTLDCT HPVEDGIMDA ANFEQFLQER IKVNGKAGNL GGGVVTIERS KSKITVTSEV PFSKRYLKYL TKKYLKKNNL RDWLRVVAN SKESYELRYF

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Macromolecule #29: Ribosomal protein L23

MacromoleculeName: Ribosomal protein L23 / type: protein_or_peptide / ID: 29 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 13.972425 KDa
SequenceString:
SGAKFRISLG LPVGAVINCA DNTGAKNLYI ISVKGIKGRL NRLPAAGVGD MVMATVKKGK PELRKKVHPA VVIRQRKSYR RKDGVFLYF EDNAGVIVNN KGEMKGSAIT GPVAKECADL WPRIASNAGS IA

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Macromolecule #30: Ribosomal protein eL24

MacromoleculeName: Ribosomal protein eL24 / type: protein_or_peptide / ID: 30 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 7.512774 KDa
SequenceString:
MKVELCSFSG YKIYPGHGRR YARTDGKVFQ FLNAKCESAF LSKRNPRQIN WTVLYRRKHK KGQ

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Macromolecule #31: Ribosomal protein uL23

MacromoleculeName: Ribosomal protein uL23 / type: protein_or_peptide / ID: 31 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 13.85636 KDa
SequenceString:
KKIRTSPTFR RPKTLRLRRQ PKYPRKSAPR RNKLDHYAII KFPLTTESAM KKIEDNNTLV FIVDVKANKH QIKQAVKKLY DIDVAKVNT LIRPDGEKKA YVRLAPDYDA LDVANKIGII

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Macromolecule #32: Ribosomal protein uL24

MacromoleculeName: Ribosomal protein uL24 / type: protein_or_peptide / ID: 32 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 15.891787 KDa
SequenceString:
MKFNPFVTSD RSKNRKRHFN APSHIRRKIM SSPLSKELRQ KYNVRSMPIR KDDEVQVVRG HYKGQQIGKV VQVYRKKYVI YIERVQREK ANGTTVHVGI HPSKVVITRL KLDKDRKKIL ERKAKSRQVG KEKGK

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Macromolecule #33: 60S ribosomal protein L27

MacromoleculeName: 60S ribosomal protein L27 / type: protein_or_peptide / ID: 33 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 15.704635 KDa
SequenceString:
GKFMKPGKVV LVLAGRYSGR KAVIVKNIDD GTSDRPYSHA LVAGIDRYPR KVTAAMGKKK IAKRSKIKSF VKVYNYNHLM PTRYSVDIP LDKTVVNKDV FRDPALKRKA RREAKVKFEE RYKTGKNKWF FQKLRF

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Macromolecule #34: Ribosomal protein uL15

MacromoleculeName: Ribosomal protein uL15 / type: protein_or_peptide / ID: 34 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 16.503391 KDa
SequenceString:
PSRLRKTRKL RGHVSHGHGR IGKHRKHPGG RGNAGGMHHH RINFDKYHPG YFGKVGMRHY HLKRNQSFCP TVNLDKLWTL VSEQTRINA AKNKTGAAPI IDVVRSGYYK VLGKGKLPKQ PVIVKAKFFS RRAEEKIKGV GGACVLVA

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Macromolecule #35: 60S ribosomal protein L29

MacromoleculeName: 60S ribosomal protein L29 / type: protein_or_peptide / ID: 35 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 8.722283 KDa
SequenceString:
AKSKNHTTHN QSRKWHRNGI KKPRSQRYES LKGVDPKFLR NMRFAKKHNK KGLKKMQANN AKAMSARAEA IKALV

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Macromolecule #36: Ribosomal protein eL30

MacromoleculeName: Ribosomal protein eL30 / type: protein_or_peptide / ID: 36 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 10.496355 KDa
SequenceString:
SINSRLQLVM KSGKYVLGYK QTLKMIRQGK AKLVILANNC PALRKSEIEY YAMLAKTGVH HYSGNNIELG TACGKYYRVC TLAIIDPGD SDIIR

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Macromolecule #37: Ribosomal protein eL31

MacromoleculeName: Ribosomal protein eL31 / type: protein_or_peptide / ID: 37 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 12.635694 KDa
SequenceString:
NEVVTREYTI NIHKRIHGVG FKKRAPRALK EIRKFAMKEM GTPDVRIDTR LNKAVWAKGI RNVPYRIRVR LSRKRNEDED SPNKLYTLV TYVPVTTFKN LQTVNVDE

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Macromolecule #38: Ribosomal protein eL32

MacromoleculeName: Ribosomal protein eL32 / type: protein_or_peptide / ID: 38 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 15.022021 KDa
SequenceString:
AALRPLVKPK IVKKRTKKFI RHQSDRYVKI KRNWRKPRGI DNRVRRRFKG QILMPNIGYG SNKKTKHMLP SGFRKFLVHN VKELEVLLM CNKSYCAEIA HNVSSKNRKA IVERAAQLAI RVTNPNARL

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Macromolecule #39: Ribosomal protein eL33

MacromoleculeName: Ribosomal protein eL33 / type: protein_or_peptide / ID: 39 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 12.433548 KDa
SequenceString:
SGRLWSKAIF AGYKRGLRNQ REHTALLKIE GVYARDETEF YLGKRCAYVY KAKNNTVTPG GKPNKTRVIW GKVTRAHGNS GMVRAKFRS NLPAKAIGHR IRVMLYPSRI

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Macromolecule #40: Ribosomal protein eL34

MacromoleculeName: Ribosomal protein eL34 / type: protein_or_peptide / ID: 40 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 12.994621 KDa
SequenceString:
VQRLTYRRRL SYNTASNKTR LSRTPGNRIV YLYTKKVGKA PKSACGVCPG RLRGVRAVRP KVLMRLSKTK KHVSRAYGGS MCAKCVRDR IKRAFLIEEQ KIVVKVLKAQ AQSQK

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Macromolecule #41: Ribosomal protein uL29

MacromoleculeName: Ribosomal protein uL29 / type: protein_or_peptide / ID: 41 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 14.460454 KDa
SequenceString:
AKIKARDLRG KKKEELLKQL EDLKVELSQL RVAKVTGGAA SKLSKIRVVR KSIARVLTVI NQTQKENLRK FYKGKKYKPL DLRPKKTRA MRRRLNKHEE NLKTKKQQRK ERLYPLRKFA VKA

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Macromolecule #42: Ribosomal protein eL36

MacromoleculeName: Ribosomal protein eL36 / type: protein_or_peptide / ID: 42 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 11.915396 KDa
SequenceString:
ALRYPMAVGL NKGHKVTKNV SKPRHSRRRG RLTKHTKFVR DMIREVCGFA PYERRAMELL KVSKDKRALK FIKKRVGTHI RAKRKREEL SNVLAAMRKA AAK

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Macromolecule #43: Ribosomal protein L37

MacromoleculeName: Ribosomal protein L37 / type: protein_or_peptide / ID: 43 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 10.102944 KDa
SequenceString:
TKGTSSFGKR RNKTHTLCRR CGSKAYHLQK STCGKCGYPA KRKRKYNWSA KAKRRNTTGT GRMRHLKIVY RRFRHGFREG ITPKPK

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Macromolecule #44: Ribosomal protein eL38

MacromoleculeName: Ribosomal protein eL38 / type: protein_or_peptide / ID: 44 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 8.107752 KDa
SequenceString:
PRKIEEIKDF LLTARRKDAK SVKIKKNKDN VKFKVRCSRY LYTLVITDKE KAEKLKQSLP PGLAVKELK

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Macromolecule #45: Ribosomal protein eL39

MacromoleculeName: Ribosomal protein eL39 / type: protein_or_peptide / ID: 45 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 6.295562 KDa
SequenceString:
SSHKTFRIKR FLAKKQKQNR PIPQWIRMKT GNKIRYNSKR RHWRRTKLGL

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Macromolecule #46: Ribosomal protein eL40

MacromoleculeName: Ribosomal protein eL40 / type: protein_or_peptide / ID: 46 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 6.199574 KDa
SequenceString:
IIEPSLRQLA QKYNCDKMIC RKCYARLHPR AVNCRKKKCG HTNNLRPKKK VK

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Macromolecule #47: Ribosomal protein eL41

MacromoleculeName: Ribosomal protein eL41 / type: protein_or_peptide / ID: 47 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 3.213075 KDa
SequenceString:
RAKWRKKRMR RLKRKRRKMR QRS

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Macromolecule #48: Ribosomal protein eL42

MacromoleculeName: Ribosomal protein eL42 / type: protein_or_peptide / ID: 48 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 12.198603 KDa
SequenceString:
VNVPKTRRTF CKKCGKHQPH KVTQYKKGKD SLYAQGKRRY DRKQSGYGGQ TKPIFRKKAK TTKKIVLRLE CVEPNCRSKR MLAIKRCKH FELGGDKKRK GQVIQ

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Macromolecule #49: Ribosomal protein eL43

MacromoleculeName: Ribosomal protein eL43 / type: protein_or_peptide / ID: 49 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Rabbit (rabbit)
Molecular weightTheoretical: 10.168153 KDa
SequenceString:
AKRTKKVGIV GKYGTRYGAS LRKMVKKIEI SQHAKYTCSF CGKTKMKRRA VGIWHCGSCM KTVAGGAWTY NTTSAVTVKS AIRRLKELK DQ

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Macromolecule #50: Signal recognition particle subunit SRP19

MacromoleculeName: Signal recognition particle subunit SRP19 / type: protein_or_peptide / ID: 50 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Dog (dog)
Molecular weightTheoretical: 12.159153 KDa
SequenceString:
DRFICIYPAY LNNKKTIAEG RRIPISKAVE NPTATEIQDV CSAVGLNVFL EKNKMYSREW NRDVQYRGRV RVQLKQEDGS LCLVQFPSR KSVMLYAAEM IPKLKT

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Macromolecule #51: Signal recognition particle subunit SRP72,Signal recognition part...

MacromoleculeName: Signal recognition particle subunit SRP72,Signal recognition particle subunit SRP72,Signal recognition particle subunit SRP72
type: protein_or_peptide / ID: 51 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Dog (dog)
Molecular weightTheoretical: 67.314922 KDa
SequenceString: MASGGSGGVS VPALWSEVNR YGQNGDFTRA LKTVNKILQI NKDDVTALHC KVVCLIQNGS FKEALNVINT HTKVLANNSL SFEKAYCEY RLNRIENALK TIESANQQTD KLKELYGQVL YRLERYDECL AVYRDLVRNS QDDYDEERKT NLSAVVAAQS N WEKVVPEN ...String:
MASGGSGGVS VPALWSEVNR YGQNGDFTRA LKTVNKILQI NKDDVTALHC KVVCLIQNGS FKEALNVINT HTKVLANNSL SFEKAYCEY RLNRIENALK TIESANQQTD KLKELYGQVL YRLERYDECL AVYRDLVRNS QDDYDEERKT NLSAVVAAQS N WEKVVPEN LGLQEGTHEL CYNAACALIG QGQLSQAMKI LQKAEDLCRR SLSEDSDGTE EDPQAELAII HGQMAYILQL QG RTEEALQ LYNQIIKLKP TDVGLLAVIA NNIITINKDQ NVFDSKKKVK LTNAEGVEFK LSKKQLQAIE FNKALLAMYT NQA EQCRKI SASLQSQSPE HLLPVLIQAA QLCREKQHTK AIELLQEFSD QHPENAAEIK LTMAQLKISQ GNISKACLIL RSIE ELKHK PGMVSALVTM YSHEEDIDSA IEVFTQAIQW YQNHQPKSSA HLSLIREAAN FKLKYGRKKE AISDLEQLWK QNPKD IHTL AQLISAYSLV DPEKAKALSK HLPSSDSMSL KVDVEALENS PGATYIRKKG GKVAGDSQPK EQGQGDLKKK KKKKKG KLP KNYDPKVTPD PERWLPMR(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)

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Macromolecule #52: Signal sequence

MacromoleculeName: Signal sequence / type: protein_or_peptide / ID: 52 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Saccharomyces cerevisiae (brewer's yeast)
Molecular weightTheoretical: 1.262751 KDa
Recombinant expressionOrganism: Oryctolagus cuniculus (rabbit)
SequenceString:
LLLLLLLLLL L

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Macromolecule #53: Signal recognition particle subunit SRP68

MacromoleculeName: Signal recognition particle subunit SRP68 / type: protein_or_peptide / ID: 53 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Dog (dog)
Molecular weightTheoretical: 65.569984 KDa
SequenceString: LSLEILQIIK ESQQQHGLRH GDFQRYRGYC SRRQRRLRKT LNFKMGNRHK FTGKKVTEDL LTDNRYLLLV LMDAERAWSY AMQLKQEAN TEPRKRFHLL SRLRKAVKHA EELERLCESN RVDAKTKLEA QAYTAYLSGM LRFEHQEWKA AIEAFNKCKT I YEKLASAF ...String:
LSLEILQIIK ESQQQHGLRH GDFQRYRGYC SRRQRRLRKT LNFKMGNRHK FTGKKVTEDL LTDNRYLLLV LMDAERAWSY AMQLKQEAN TEPRKRFHLL SRLRKAVKHA EELERLCESN RVDAKTKLEA QAYTAYLSGM LRFEHQEWKA AIEAFNKCKT I YEKLASAF TEEQAVLYNQ RVEEISPNIR YCAYNIGDQS AINELMQMRL RSGGTEGLLA EKLEALITQT RAKQAATMSE VE WRGRTVP VKIDKVRIFL LGLADNEAAI AQAESEETKE RLFESMLSEC RDAIQAVREE LKPDQKQRDY TLDGESGKVS NLQ YLHSYL TYIKLSTAIR RNENMAKGLQ KALQQQPEDE SKRSPRPQDL IRLYDIILQN LVELLQLPGL EEDRAFQKEI GLKT LVFKA YRCFFIAQSY VLVKKWSEAL VLYDRVLKYA NEVNSDAGAF RNSLKDLPDV QELITQVRSE KCSLQAAAIL DASDS HQPE TSSQVKDNKP LVERFETFCL DPSLVTKQAN LVHFPPGFQP IPCKPLFFDL ALNHVAFPPL EDKLEQKTKS GLTGYI KGI FGFRS

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Macromolecule #54: SRP receptor beta subunit

MacromoleculeName: SRP receptor beta subunit / type: protein_or_peptide / ID: 54 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Oryctolagus cuniculus (rabbit)
Molecular weightTheoretical: 23.588018 KDa
Recombinant expressionOrganism: Escherichia coli (E. coli)
SequenceString: MRRSSQRAVL LLGLCDSGKT LLFVRLLTGH YRDTQTSITD SSATYRVNNN RGNSLTLIDL PGHESLRLQF LERFKTSARA VVFVVDSAA FQREVKDVAE FLYQVLIDSM SLKNTPSFLI ACNKQDIAMA KSAKLIQQQL EKELNTLRVT RSAAPSTLDS S STAPAQLG ...String:
MRRSSQRAVL LLGLCDSGKT LLFVRLLTGH YRDTQTSITD SSATYRVNNN RGNSLTLIDL PGHESLRLQF LERFKTSARA VVFVVDSAA FQREVKDVAE FLYQVLIDSM SLKNTPSFLI ACNKQDIAMA KSAKLIQQQL EKELNTLRVT RSAAPSTLDS S STAPAQLG KKGKEFEFSQ LPLKVEFLEC SAKGGRGDPG SADIQDLEKW LAKIA

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Macromolecule #55: Signal recognition particle 9 kDa protein

MacromoleculeName: Signal recognition particle 9 kDa protein / type: protein_or_peptide / ID: 55 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Dog (dog)
Molecular weightTheoretical: 8.694115 KDa
SequenceString:
AQYQTWEEFS RAAEKLYLAD PMKARVVLKY RHSDGSLCIK VTDDLVCLVY RTDQAQDVKK IEKFHSQLMR LMVA

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Macromolecule #56: Signal recognition particle 54 kDa protein

MacromoleculeName: Signal recognition particle 54 kDa protein / type: protein_or_peptide / ID: 56 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Dog (dog)
Molecular weightTheoretical: 55.775672 KDa
SequenceString: MVLADLGRKI TSALRSLSNA TIINEEVLNA MLKEVCTALL EADVNIKLVK QLRENVKSAI DLEEMASGLN KRKMIQHAVF KELVKLVDP GVKAWTPTKG KQNVIMFVGL QGSGKTTTCS KLAYYYQRKG WKTCLICADT FRAGAFDQLK QNATKARIPF Y GSYTEMDP ...String:
MVLADLGRKI TSALRSLSNA TIINEEVLNA MLKEVCTALL EADVNIKLVK QLRENVKSAI DLEEMASGLN KRKMIQHAVF KELVKLVDP GVKAWTPTKG KQNVIMFVGL QGSGKTTTCS KLAYYYQRKG WKTCLICADT FRAGAFDQLK QNATKARIPF Y GSYTEMDP VIIASEGVEK FKNENFEIII VDTSGRHKQE DSLFEEMLQV ANAIQPDNIV YVMDASIGQA CEAQAKAFKD KV DVASVIV TKLDGHAKGG GALSAVAATK SPIIFIGTGE HIDDFEPFKT QPFISKLLGM GDIEGLIDKV NELKLDDNEA LIE KLKHGQ FTLRDMYEQF QNIMKMGPFS QILGMIPGFG TDFMSKGNEQ ESMARLKKLM TIMDSMNDQE LDSTDGAKVF SKQP GRIQR VARGSGVSTR DVQELLTQYT KFAQMVKKMG GIKGLFKGGD MSKNVSQSQM AKLNQQMAKM MDPRVLHHMG GMAGL QSMM RQFQQGAAGN MKGMMGFNNM

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Macromolecule #57: SRP receptor alpha subunit

MacromoleculeName: SRP receptor alpha subunit / type: protein_or_peptide / ID: 57 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Oryctolagus cuniculus (rabbit)
Molecular weightTheoretical: 72.232578 KDa
Recombinant expressionOrganism: Escherichia coli (E. coli)
SequenceString: HHHHHHDYDI PTTENLYFQG MLDFFTIFSK GGLVLWCFQG VSDSCTGPVN ALIRSVLLQE RGGNNSFTHE ALTLKYKLDN QFELVFVVG FQKILTLTYV DKLIDDVHRL FRDKYRTEIQ QQSALSLLNG TFDFQNDFLR LLREAEESSK IRAPTTMKKF E DSEKAKKP ...String:
HHHHHHDYDI PTTENLYFQG MLDFFTIFSK GGLVLWCFQG VSDSCTGPVN ALIRSVLLQE RGGNNSFTHE ALTLKYKLDN QFELVFVVG FQKILTLTYV DKLIDDVHRL FRDKYRTEIQ QQSALSLLNG TFDFQNDFLR LLREAEESSK IRAPTTMKKF E DSEKAKKP VRSMIETRGE KPKEKAKNSK KKGAKKEGSD GPLATSKAVP AEKSGLPVGP ENGVELSKEE LIRRKREEFI QK HGRGLEK SSKSKSEAPK EKGKKAPRVW ELGGCANKEV LDYSTPTTNG APEAALSEDI NLIRGTGPGG QLQDLDCSSS DDE GAAQNS TKPSSTKGTL GGMFGMLKGL VGSKSLSRED MESVLDKMRD HLIAKNVAAD IAVQLCESVA NKLEGKVMGT FSTV TSTVK QALQESLVQI LQPQRRVDML RDIMDAQRRQ RPYVVTFCGV NGVGKSTNLA KISFWLLENG FSVLIAACDT FRAGA VEQL RTHTRRLSAL HPPEKHGGRT MVQLFEKGYG KDAAGIAMEA IAFARNQGFD VVLVDTAGRM QDNAPLMTAL AKLITV NTP DLVLFVGEAL VGNEAVDQLV KFNRALADHS MAQTPRLIDG IVLTKFDTID DKVGAAISMT YITSKPIVFV GTGQTYC DL RSLNAKAVVA ALMKA

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Macromolecule #58: Signal recognition particle 14 kDa protein

MacromoleculeName: Signal recognition particle 14 kDa protein / type: protein_or_peptide / ID: 58 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Dog (dog)
Molecular weightTheoretical: 12.512716 KDa
SequenceString:
MVLLESEQFL TELTRLFQKC RLSGSVFITL KKYDGRTKPI PRKGSVEGFE PSDNKCLLRA TDGKKKISTV VSSKEVNKFQ MAYSNLLRA NMDGLKKRDK KSKSKKSKPA Q

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Macromolecule #59: MAGNESIUM ION

MacromoleculeName: MAGNESIUM ION / type: ligand / ID: 59 / Number of copies: 133 / Formula: MG
Molecular weightTheoretical: 24.305 Da

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Macromolecule #60: ZINC ION

MacromoleculeName: ZINC ION / type: ligand / ID: 60 / Number of copies: 3 / Formula: ZN
Molecular weightTheoretical: 65.409 Da

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Macromolecule #61: GUANOSINE-5'-TRIPHOSPHATE

MacromoleculeName: GUANOSINE-5'-TRIPHOSPHATE / type: ligand / ID: 61 / Number of copies: 1 / Formula: GTP
Molecular weightTheoretical: 523.18 Da
Chemical component information

ChemComp-GTP:
GUANOSINE-5'-TRIPHOSPHATE / GTP, energy-carrying molecule*YM / Guanosine triphosphate

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Macromolecule #62: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER

MacromoleculeName: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER / type: ligand / ID: 62 / Number of copies: 2 / Formula: GNP
Molecular weightTheoretical: 522.196 Da
Chemical component information

ChemComp-GNP:
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER / GppNHp, GMPPNP, energy-carrying molecule analogue*YM / 5'-Guanylyl imidodiphosphate

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Experimental details

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Structure determination

Methodcryo EM
Processingsingle particle reconstruction
Aggregation stateparticle

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Sample preparation

BufferpH: 7.6
GridModel: Quantifoil R2/2 / Material: COPPER / Support film - Material: CARBON
VitrificationCryogen name: ETHANE-PROPANE / Chamber humidity: 100 % / Chamber temperature: 277 K / Instrument: FEI VITROBOT MARK IV

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Electron microscopy

MicroscopeFEI TITAN KRIOS
Electron beamAcceleration voltage: 300 kV / Electron source: FIELD EMISSION GUN
Electron opticsIllumination mode: FLOOD BEAM / Imaging mode: BRIGHT FIELDBright-field microscopy / Cs: 2.7 mm / Nominal magnification: 59000
Sample stageSpecimen holder model: FEI TITAN KRIOS AUTOGRID HOLDER
Image recordingFilm or detector model: FEI FALCON II (4k x 4k) / Detector mode: INTEGRATING / Average electron dose: 40.0 e/Å2
Experimental equipment
Model: Titan Krios / Image courtesy: FEI Company

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Image processing

Initial angle assignmentType: PROJECTION MATCHING
Final angle assignmentType: PROJECTION MATCHING
Final reconstructionResolution.type: BY AUTHOR / Resolution: 3.7 Å / Resolution method: FSC 0.143 CUT-OFF / Number images used: 45800

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Atomic model buiding 1

RefinementSpace: RECIPROCAL / Protocol: RIGID BODY FIT
Output model

PDB-6frk:
Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex

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