[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 121 items for (author: razi & a)

EMDB-41963:
Preholo-Proteasome from Beta 3 D205 deletion
Method: single particle / : Walsh Jr RM, Rawson S, Velez B, Blickling M, Razi A, Hanna J

EMDB-41993:
Proteasome 20S Core Particle from Beta 3 D205 deletion
Method: single particle / : Walsh Jr RM, Rawson S, Velez B, Blickling M, Razi A, Hanna J

PDB-8u6y:
Preholo-Proteasome from Beta 3 D205 deletion
Method: single particle / : Walsh Jr RM, Rawson S, Velez B, Blickling M, Razi A, Hanna J

PDB-8u7u:
Proteasome 20S Core Particle from Beta 3 D205 deletion
Method: single particle / : Walsh Jr RM, Rawson S, Velez B, Blickling M, Razi A, Hanna J

EMDB-16603:
Type2 alpha-synuclein filament assembled in vitro by wild-type and mutant (7 residues insertion) protein
Method: helical / : Yang Y, Garringer JH, Shi Y, Lovestam S, Sew PC, Zhang XJ, Kotecha A, Bacioglu M, Koto A, Takao M, Spillantini GM, Ghetti B, Vidal R, Murzin GA, Scheres HWS, Goedert M

EMDB-16604:
Alpha-synuclein filament assembled in vitro with mutant (7 residues insertion) protein
Method: helical / : Yang Y, Garringer JH, Shi Y, Lovestam S, Sew PC, Zhang XJ, Kotecha A, Bacioglu M, Koto A, Takao M, Spillantini GM, Ghetti B, Vidal R, Murzin GA, Scheres HWS, Goedert M

EMDB-16608:
WT alpha-synuclein filament assembled in vitro
Method: helical / : Yang Y, Garringer JH, Shi Y, Lovestam S, Sew PC, Zhang XJ, Kotecha A, Bacioglu M, Koto A, Takao M, Spillantini GM, Ghetti B, Vidal R, Murzin GA, Scheres HWS, Goedert M

PDB-8ceb:
Type2 alpha-synuclein filament assembled in vitro by wild-type and mutant (7 residues insertion) protein
Method: helical / : Yang Y, Garringer JH, Shi Y, Lovestam S, Sew PC, Zhang XJ, Kotecha A, Bacioglu M, Koto A, Takao M, Spillantini GM, Ghetti B, Vidal R, Murzin GA, Scheres HWS, Goedert M

EMDB-16600:
Type1 alpha-synuclein filament assembled in vitro by wild-type and mutant (7 residues insertion) protein
Method: helical / : Yang Y, Garringer JH, Shi Y, Lovestam S, Peak-Chew SY, Zhang XJ, Kotecha A, Bacioglu M, Koto A, Takao M, Spillantini GM, Ghetti B, Vidal R, Murzin GA, Scheres HWS, Goedert M

PDB-8ce7:
Type1 alpha-synuclein filament assembled in vitro by wild-type and mutant (7 residues insertion) protein
Method: helical / : Yang Y, Garringer JH, Shi Y, Lovestam S, Peak-Chew SY, Zhang XJ, Kotecha A, Bacioglu M, Koto A, Takao M, Spillantini GM, Ghetti B, Vidal R, Murzin GA, Scheres HWS, Goedert M

EMDB-16188:
Cryo-EM structure of alpha-synuclein singlet filament from Juvenile-onset synucleinopathy
Method: helical / : Yang Y, Garringer JH, Shi Y, Lovestam S, Peak-Chew SY, Zhang XJ, Kotecha A, Bacioglu M, Koto A, Takao M, Spillantini GM, Ghetti B, Vidal R, Murzin GA, Scheres HWS, Goedert M

EMDB-16189:
Cryo-EM structure of alpha-synuclein filaments doublet from Juvenile-onset synucleinopathy
Method: helical / : Yang Y, Garringer JH, Shi Y, Lovestam S, Peak-Chew SY, Zhang XJ, Kotecha A, Bacioglu M, Koto A, Takao M, Spillantini GM, Ghetti B, Vidal R, Murzin GA, Scheres HWS, Goedert M

PDB-8bqv:
Cryo-EM structure of alpha-synuclein singlet filament from Juvenile-onset synucleinopathy
Method: helical / : Yang Y, Garringer JH, Shi Y, Lovestam S, Peak-Chew SY, Zhang XJ, Kotecha A, Bacioglu M, Koto A, Takao M, Spillantini GM, Ghetti B, Vidal R, Murzin GA, Scheres HWS, Goedert M

PDB-8bqw:
Cryo-EM structure of alpha-synuclein filaments doublet from Juvenile-onset synucleinopathy
Method: helical / : Yang Y, Garringer JH, Shi Y, Lovestam S, Peak-Chew SY, Zhang XJ, Kotecha A, Bacioglu M, Koto A, Takao M, Spillantini GM, Ghetti B, Vidal R, Murzin GA, Scheres HWS, Goedert M

EMDB-27177:
sd1.040 Fab in complex with SARS-CoV-2 Spike 2P glycoprotein
Method: single particle / : Abernathy ME, Barnes CO

PDB-8d48:
sd1.040 Fab in complex with SARS-CoV-2 Spike 2P glycoprotein
Method: single particle / : Abernathy ME, Barnes CO

EMDB-15622:
Cryo-EM structure of yeast Elongator complex
Method: single particle / : Jaciuk M, Scherf D, Kaszuba K, Gaik M, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Biela A, Dobosz D, Lin TY, Abbassi N, Hammermeister A, Chramiec-Glabik A, Kosinski J, Schaffrath R, Glatt S

EMDB-15623:
Cryo-EM structure of yeast Elp123 in complex with alanine tRNA
Method: single particle / : Jaciuk M, Scherf D, Kaszuba K, Gaik M, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Biela A, Dobosz D, Lin TY, Abbassi N, Hammermeister A, Chramiec-Glabik A, Kosinski J, Schaffrath R, Glatt S

EMDB-15625:
Cryo-EM structure of mouse Elp123 in complex with alanine tRNA
Method: single particle / : Jaciuk M, Scherf D, Kaszuba K, Gaik M, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Biela A, Dobosz D, Lin TY, Abbassi N, Hammermeister A, Chramiec-Glabik A, Kosinski J, Schaffrath R, Glatt S

EMDB-15626:
Cryo-EM structure of mouse Elongator complex
Method: single particle / : Jaciuk M, Scherf D, Kaszuba K, Gaik M, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Biela A, Dobosz D, Lin TY, Abbassi N, Hammermeister A, Chramiec-Glabik A, Kosinski J, Schaffrath R, Glatt S

EMDB-15635:
Cryo-EM structure of yeast Elp456 subcomplex
Method: single particle / : Jaciuk M, Scherf D, Kaszuba K, Gaik M, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Biela A, Dobosz D, Lin TY, Abbassi N, Hammermeister A, Chramiec-Glabik A, Kosinski J, Schaffrath R, Glatt S

EMDB-15682:
Cryo-EM structure of mouse Elp123 with bound SAM
Method: single particle / : Jaciuk M, Scherf D, Kaszuba K, Gaik M, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Biela A, Dobosz D, Lin TY, Abbassi N, Hammermeister A, Chramiec-Glabik A, Kosinski J, Schaffrath R, Glatt S

PDB-8asv:
Cryo-EM structure of yeast Elongator complex
Method: single particle / : Jaciuk M, Scherf D, Kaszuba K, Gaik M, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Biela A, Dobosz D, Lin TY, Abbassi N, Hammermeister A, Chramiec-Glabik A, Kosinski J, Schaffrath R, Glatt S

PDB-8asw:
Cryo-EM structure of yeast Elp123 in complex with alanine tRNA
Method: single particle / : Jaciuk M, Scherf D, Kaszuba K, Gaik M, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Biela A, Dobosz D, Lin TY, Abbassi N, Hammermeister A, Chramiec-Glabik A, Kosinski J, Schaffrath R, Glatt S

PDB-8at6:
Cryo-EM structure of yeast Elp456 subcomplex
Method: single particle / : Jaciuk M, Scherf D, Kaszuba K, Gaik M, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Biela A, Dobosz D, Lin TY, Abbassi N, Hammermeister A, Chramiec-Glabik A, Kosinski J, Schaffrath R, Glatt S

PDB-8avg:
Cryo-EM structure of mouse Elp123 with bound SAM
Method: single particle / : Jaciuk M, Scherf D, Kaszuba K, Gaik M, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Biela A, Dobosz D, Lin TY, Abbassi N, Hammermeister A, Chramiec-Glabik A, Kosinski J, Schaffrath R, Glatt S

EMDB-14802:
Cryo-EM structure of RCMV-E E27 bound to human DDB1 (deltaBPB) and rat STAT2 CCD
Method: single particle / : Lauer S, Spahn CMT, Schwefel D

EMDB-14812:
Cryo-EM structure of RCMV-E E27 bound to human DDB1 (deltaBPB) and full-length rat STAT2
Method: single particle / : Lauer S, Spahn CMT, Schwefel D

PDB-7zn7:
Cryo-EM structure of RCMV-E E27 bound to human DDB1 (deltaBPB) and rat STAT2 CCD
Method: single particle / : Lauer S, Spahn CMT, Schwefel D

PDB-7znn:
Cryo-EM structure of RCMV-E E27 bound to human DDB1 (deltaBPB) and full-length rat STAT2
Method: single particle / : Lauer S, Spahn CMT, Schwefel D

EMDB-25915:
SARS-CoV-2 endoribonuclease Nsp15 bound to dsRNA
Method: single particle / : Frazier MN, Krahn JM, Butay KJ, Dillard LB, Borgnia MJ, Stanley RE

EMDB-26073:
SARS-CoV-2 endoribonuclease Nsp15 bound to dsRNA
Method: single particle / : Frazier MN, Krahn JM, Butay KJ, Dillard LB, Borgnia MJ, Stanley RE

PDB-7tj2:
SARS-CoV-2 endoribonuclease Nsp15 bound to dsRNA
Method: single particle / : Frazier MN, Krahn JM, Butay KJ, Dillard LB, Borgnia MJ, Stanley RE

PDB-7tqv:
SARS-CoV-2 endoribonuclease Nsp15 bound to dsRNA
Method: single particle / : Frazier MN, Krahn JM, Butay KJ, Dillard LB, Borgnia MJ, Stanley RE

EMDB-14174:
TMEM106B filaments with Fold I from Alzheimer's disease (case 1)
Method: helical / : Lovestam S, Schweighauser M, Scheres SHW

EMDB-14176:
TMEM106B filaments with Fold I-d from Multiple system atrophy (case 18)
Method: helical / : Lovestam S, Schweighauser M, Scheres SHW

EMDB-14187:
TMEM106B filaments with Fold IIa from Multiple system atrophy (case 19)
Method: helical / : Lovestam S, Schweighauser M, Scheres SHW

EMDB-14188:
TMEM106B filaments with Fold IIb from Multiple system atrophy (case 19)
Method: helical / : Lovestam S, Schweighauser M, Scheres SHW

EMDB-14189:
TMEM106B filaments with Fold III from Multiple system atrophy (case 17)
Method: helical / : Lovestam S, Schweighauser M, Scheres SHW

PDB-7qvc:
TMEM106B filaments with Fold I from Alzheimer's disease (case 1)
Method: helical / : Lovestam S, Schweighauser M, Scheres SHW

PDB-7qvf:
TMEM106B filaments with Fold I-d from Multiple system atrophy (case 18)
Method: helical / : Lovestam S, Schweighauser M, Scheres SHW

PDB-7qwg:
TMEM106B filaments with Fold IIa from Multiple system atrophy (case 19)
Method: helical / : Lovestam S, Schweighauser M, Scheres SHW

PDB-7qwl:
TMEM106B filaments with Fold IIb from Multiple system atrophy (case 19)
Method: helical / : Lovestam S, Schweighauser M, Scheres SHW

PDB-7qwm:
TMEM106B filaments with Fold III from Multiple system atrophy (case 17)
Method: helical / : Lovestam S, Schweighauser M, Scheres SHW

EMDB-25143:
Structure of positive allosteric modulator-bound active human calcium-sensing receptor
Method: single particle / : Park J, Zuo H, Frangaj A, Fu Z, Yen LY, Zhang Z, Mosyak L, Slavkovich VN, Liu J, Ray KM, Cao B, Vallese F, Geng Y, Chen S, Grassucci R, Dandey VP, Tan YZ, Eng E, Lee Y, Kloss B, Liu Z, Hendrickson WA, Potter CS, Carragher B, Graziano J, Conigrave AD, Frank J, Clarke OB, Fan QR

EMDB-25144:
Structure of positive allosteric modulator-free active human calcium-sensing receptor
Method: single particle / : Park J, Zuo H, Frangaj A, Fu Z, Yen LY, Zhang Z, Mosyak L, Slavkovich VN, Liu J, Ray KM, Cao B, Vallese F, Geng Y, Chen S, Grassucci R, Dandey VP, Tan YZ, Eng E, Lee Y, Kloss B, Liu Z, Hendrickson WA, Potter CS, Carragher B, Graziano J, Conigrave AD, Frank J, Clarke OB, Fan QR

EMDB-25145:
Structure of negative allosteric modulator-bound inactive human calcium-sensing receptor
Method: single particle / : Park J, Zuo H, Frangaj A, Fu Z, Yen LY, Zhang Z, Mosyak L, Slavkovich VN, Liu J, Ray KM, Cao B, Vallese F, Geng Y, Chen S, Grassucci R, Dandey VP, Tan YZ, Eng E, Lee Y, Kloss B, Liu Z, Hendrickson WA, Potter CS, Carragher B, Graziano J, Conigrave AD, Frank J, Clarke OB, Fan QR

PDB-7sil:
Structure of positive allosteric modulator-bound active human calcium-sensing receptor
Method: single particle / : Park J, Zuo H, Frangaj A, Fu Z, Yen LY, Zhang Z, Mosyak L, Slavkovich VN, Liu J, Ray KM, Cao B, Vallese F, Geng Y, Chen S, Grassucci R, Dandey VP, Tan YZ, Eng E, Lee Y, Kloss B, Liu Z, Hendrickson WA, Potter CS, Carragher B, Graziano J, Conigrave AD, Frank J, Clarke OB, Fan QR

PDB-7sim:
Structure of positive allosteric modulator-free active human calcium-sensing receptor
Method: single particle / : Park J, Zuo H, Frangaj A, Fu Z, Yen LY, Zhang Z, Mosyak L, Slavkovich VN, Liu J, Ray KM, Cao B, Vallese F, Geng Y, Chen S, Grassucci R, Dandey VP, Tan YZ, Eng E, Lee Y, Kloss B, Liu Z, Hendrickson WA, Potter CS, Carragher B, Graziano J, Conigrave AD, Frank J, Clarke OB, Fan QR

PDB-7sin:
Structure of negative allosteric modulator-bound inactive human calcium-sensing receptor
Method: single particle / : Park J, Zuo H, Frangaj A, Fu Z, Yen LY, Zhang Z, Mosyak L, Slavkovich VN, Liu J, Ray KM, Cao B, Vallese F, Geng Y, Chen S, Grassucci R, Dandey VP, Tan YZ, Eng E, Lee Y, Kloss B, Liu Z, Hendrickson WA, Potter CS, Carragher B, Graziano J, Conigrave AD, Frank J, Clarke OB, Fan QR

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more